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ET12927

CSHL Arabidopsis genetrap mutant lines

Original: ET12927

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET12927

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 7308183 [Map]; Strand: w
      • AT2G16870.1 - [+] show detail - Disease resistance protein (TIR-NBS-LRR class) family
        Distance: 0; Region: exon4 (CDS)
    Flanking Genome Sequence: ET12927 - 5-prime edge 
    TCCTACTTTC TCCCTGCTCC TCCTCTATGG ATTCTGTCGT TTCCTTACCC 
    AACACAAGCT TTCCCATGTT CCTCACAATA TTGGATAGAT CAAAGCAGAT 
    GCCGAGCCCA CTC

AT2G16870.1

Model type
Protein coding
Short Description
Disease resistance protein (TIR-NBS-LRR class) family
Computational Description
Disease resistance protein (TIR-NBS-LRR class) family; FUNCTIONS IN: transmembrane receptor activity, nucleoside-triphosphatase activity, nucleotide binding, ATP binding; INVOLVED IN: signal transduction, apoptosis, defense response, innate immune response; LOCATED IN: intrinsic to membrane; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), NB-ARC (InterPro:IPR002182), Toll-Interleukin receptor (InterPro:IPR000157), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) family (TAIR:AT1G64070.1); Has 20392 Blast hits to 15740 proteins in 660 species: Archae - 17; Bacteria - 1396; Metazoa - 2110; Fungi - 75; Plants - 16264; Viruses - 0; Other Eukaryotes - 530 (source: NCBI BLink).
Link
InterPro Scan - TAIR