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ET12930

CSHL Arabidopsis genetrap mutant lines

Original: ET12930

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET12930

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26430467 [Map]; Strand: c
      • AT5G66110.1 - [+] show detail - Heavy metal transport/detoxification superfamily protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: ET12930 - 3-prime edge 
    TATTTTACCG ACCGTTACCG ACCGTTTTCA TCCCTAGGTG GAAGGCATGA 
    AAGGAGTCAG CAAAGTCACC GTCGATCCTA AACAGAGCAA ACTCACGGTC 
    GAGGGATTCG TCCAACCGAG CAAGGTGGTG CATCGGGTGA TGCATCGGAC 
    AGGGAAGAAG GCGGAGCTGT GGCCTTACGT ACCTTACGAG GTGGTGCCAC 
    ACCCTTACGC ACCTGGTGCC TACGACAAGA AGGCCCCTCC TGGTTACGTT 
    CGTAATGCAC TCGCCGACCC TCTAGTGGCC CCGCTTGCTC GTGCCAGCTC 
    CTTCAAGGTC AAATACACTT CTGCTTTCAG CGATGACAAT CCCAACG

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26430397 [Map]; Strand: c
      • AT5G66110.1 - [+] show detail - Heavy metal transport/detoxification superfamily protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: ET12930 - 5-prime edge 
    CTTTCTCCCT GCTTCCCCGA CTTCCTCACC CGTCTCTCGC ACCCTTCGCA 
    GTCCATCTTC ACTTTTATCT CCACCTTCTT TTTTCATCAT ACGAAACACA 
    GTCTCGTTAC ACAACAGTTA CAAGCAAAAA AAAGGAATCA GATATATCAG 
    AGAAGGGAGA AGAGTGCCTG GAACTGCTTA AGCTTTTTGT GATGTTTCCG 
    GTAACAAATG TCTCGGAAGC CCATTAGCGC CGATTACGAC AGTTTTTTTT 
    CCTTCTCTGG TAACTTCAAA TTGTCTTATT AAAGCATACA TAAAGTAAAG 
    CCAACATGCC CACTTTGCAC GTGGACGAGT GAAGGAATGG TATGTCACTG 
    CTGAGATAGC CAGCTGTTTT CAATTTAGAG CTCTCTAGTA TTTCGGATAT 
    GGTTTGACGT GAAACCCTCT CTGCCGAGTG GCGGGTATCT TCAGATATTA 
    CATTTTCTTA ACAAGGATGA CTAAATCAAT GATCAGCCAA ACACCAACTA 
    TTAAAGTTTC CTATCCAAAA AATTTTTAAA AACCAGAAAA GTTCAAAAAA 
    AGTTGAGCAG CATATTATTG TTTTTTTTCT TATGAGACTG AGTATCAATC 
    AGTTCATATC CAATTCTCGA CAAAACACAA AAAAGGAAAG GAAGAGAGAT 
    AGGCTTGCAA ACACATCTTT CTTT

AT5G66110.1

Model type
Protein coding
Short Description
Heavy metal transport/detoxification superfamily protein
Computational Description
Heavy metal transport/detoxification superfamily protein ; FUNCTIONS IN: metal ion binding; INVOLVED IN: metal ion transport; LOCATED IN: plasma membrane; EXPRESSED IN: cultured cell, leaf; EXPRESSED DURING: LP.04 four leaves visible; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: farnesylated protein 6 (TAIR:AT4G38580.1); Has 1185 Blast hits to 1108 proteins in 39 species: Archae - 2; Bacteria - 2; Metazoa - 2; Fungi - 3; Plants - 1176; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR