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ET12935

CSHL Arabidopsis genetrap mutant lines

Original: ET12935

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET12935

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 5047504 [Map]; Strand: c
      • AT3G14990.1 - [+] show detail - Class I glutamine amidotransferase-like superfamily protein
        Distance: 0; Region: exon1 (5UTR)
      • AT3G14990.3 - [+] show detail - Class I glutamine amidotransferase-like superfamily protein
        Distance: 0; Region: exon1 (5UTR)
      • AT3G14990.2 - [+] show detail - Class I glutamine amidotransferase-like superfamily protein
        Distance: -85; Region: promoter
    Flanking Genome Sequence: ET12935 - 3-prime edge 
    AAACGGTAGA GGTATTTTAC CGACCGTTAC CGACCGTTTT CATCCCTGGT 
    CCGGAACTAT GGTTGCAATT ACGAAAACGG TGTGTGGGGC TTCAAGATTC 
    CGAGATCATA CTTTTATCGC TCCTCGAACA TAACGATTTT

AT3G14990.1

Model type
Protein coding
Short Description
Class I glutamine amidotransferase-like superfamily protein
Computational Description
Class I glutamine amidotransferase-like superfamily protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: response to cadmium ion, thiamin biosynthetic process; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: DJ-1 (InterPro:IPR006287), ThiJ/PfpI (InterPro:IPR002818); BEST Arabidopsis thaliana protein match is: Class I glutamine amidotransferase-like superfamily protein (TAIR:AT1G53280.1); Has 10802 Blast hits to 6415 proteins in 1883 species: Archae - 336; Bacteria - 9086; Metazoa - 526; Fungi - 85; Plants - 335; Viruses - 0; Other Eukaryotes - 434 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G14990.2

Model type
Protein coding
Short Description
Class I glutamine amidotransferase-like superfamily protein
Computational Description
Class I glutamine amidotransferase-like superfamily protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: response to cadmium ion, thiamin biosynthetic process; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: DJ-1 (InterPro:IPR006287), ThiJ/PfpI (InterPro:IPR002818); BEST Arabidopsis thaliana protein match is: Class I glutamine amidotransferase-like superfamily protein (TAIR:AT1G53280.1); Has 10809 Blast hits to 6441 proteins in 1899 species: Archae - 334; Bacteria - 9077; Metazoa - 525; Fungi - 83; Plants - 359; Viruses - 0; Other Eukaryotes - 431 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G14990.3

Model type
Protein coding
Short Description
Class I glutamine amidotransferase-like superfamily protein
Computational Description
Class I glutamine amidotransferase-like superfamily protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: response to cadmium ion, thiamin biosynthetic process; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: DJ-1 (InterPro:IPR006287), ThiJ/PfpI (InterPro:IPR002818); BEST Arabidopsis thaliana protein match is: Class I glutamine amidotransferase-like superfamily protein (TAIR:AT1G53280.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR