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ET12949

CSHL Arabidopsis genetrap mutant lines

Original: ET12949

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET12949

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 26313354 [Map]; Strand: c
      • AT1G69860.1 - [+] show detail - Major facilitator superfamily protein
        Distance: 1180; Region: intergenic
      • AT1G69870.1 - [+] show detail - nitrate transporter 1.7
        Distance: -2673; Region: intergenic
    Flanking Genome Sequence: ET12949 - 3-prime edge
    AAACGGTAGA GGATTTTACC GACCGTTACC GACCGTTTTC ATCCCTAGAT 
    CAGTGTATTT AATGTAATTT GAAATTAATC ATAAGAGTAC AAAGTGGGAA
    TGCAAATACG ATGGTCCACC GATCCTTGTC ATGGTCTTGT ACACACTTGA
    AACAGAATAC AAGTCAACGA AGGTGTCTCT TATTGATTTC TCTTACTTCT
    TAGGCTTATA GCTCTTGCCT TCTGAAAGTT ACAGAATATT CCCTTTCATA
    GAATCTTCAA CTTTCTATTT TCATGTTATT GGTTTAAAGG TCTAATAGAA
    TCTTTAATGT TGTAATGTGT CTTAGACTTA AATGAATTCA TTACTTGAAG
    ACATGTATTC CACGCTGAAA ACACAATTCT TTTGAATATA GTTTTATGAT
    ATAATCATGA AAACCTATAT TTAGATTTGC TTAGGACTCT AAATATATCA
    CAATGGATAC GATCTTGAAA TCCCACTTAT

AT1G69860.1

Model type
Protein coding
Short Description
Major facilitator superfamily protein
Computational Description
Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: oligopeptide transport; LOCATED IN: membrane; CONTAINS InterPro DOMAIN/s: Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: nitrate transporter 1.7 (TAIR:AT1G69870.1); Has 5388 Blast hits to 5286 proteins in 980 species: Archae - 0; Bacteria - 2151; Metazoa - 479; Fungi - 383; Plants - 2163; Viruses - 0; Other Eukaryotes - 212 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G69870.1

Model type
Protein coding
Short Description
nitrate transporter 1.7
Curator Summary
Encodes a low affinity nitrate transporter NRT1.7. Expressed in phloem. Responsible for source-to-sink remobilization of nitrate.
Computational Description
nitrate transporter 1.7 (NRT1.7); FUNCTIONS IN: low affinity nitrate transmembrane transporter activity, transporter activity; INVOLVED IN: oligopeptide transport, response to salt stress, nitrate transport, low affinity nitrate transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: nitrate transporter 1.6 (TAIR:AT1G27080.1); Has 4600 Blast hits to 4423 proteins in 820 species: Archae - 0; Bacteria - 1236; Metazoa - 519; Fungi - 428; Plants - 2212; Viruses - 0; Other Eukaryotes - 205 (source: NCBI BLink).
Link
InterPro Scan - TAIR