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ET12950

CSHL Arabidopsis genetrap mutant lines

Original: ET12950

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET12950

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 11510269 [Map]; Strand: w
      • AT3G29647.1 - [+] show detail - transposable element gene
        Distance: 1226; Region: intergenic
      • AT3G29648.1 - [+] show detail - transposable element gene
        Distance: -4667; Region: intergenic
    Flanking Genome Sequence: ET12950 - 5-prime edge 
    CCTACTTTCT CCCTGTATTC CGGTGACTGG AAGTAATTCC CCGACGACAA 
    TGGAGTTAAT GAAGAAACAA CTTTTCTCCA GACCTGCCAC GTGCCCGTGT 
    TTATCTTTTG TTAAGACATG TGTCTATGAG CTGTATTGAT ATAAGCTTTA 
    ATCTGTGTCT TTGGTTTATA TTAAATATTT AAATGGGTCT TGTACTTTAT 
    GTGTAATGCC CTTTGGACTC TTTAATAAAA TGAAGTTTGA CGAAAAGAAA 
    AGAAAAGTGT CAGGCAATTT TTTGGAATAA ACAATCCTCA GTTATTTCAT 
    CTCACTCGA

AT3G29647.1

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
pseudogene, hypothetical protein
Link
InterPro Scan - TAIR

AT3G29648.1

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
CACTA-like transposase family (Tnp2/En/Spm), has a 2.5e-169 P-value blast match to gb|AAG52024.1|AC022456_5 Tam1-homologous transposon protein TNP2, putative; 12762-16371 (Arabidopsis thaliana) (CACTA-element)
Link
InterPro Scan - TAIR