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ET12955

CSHL Arabidopsis genetrap mutant lines

Original: ET12955

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET12955

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 23496757 [Map]; Strand: c
      • AT1G63350.1 - [+] show detail - Disease resistance protein (CC-NBS-LRR class) family
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: ET12955 - 3-prime edge 
    GTAGAGGTAT TTTACCGACC GTTACCGACC GTTTTCATCC CTACATACAT 
    CTAAGGACCG AGTGGTGAAT ACCACTTTAC ATTTGTTTTT TATTGTTGGA 
    AAGGGGACTC CGATCTCAAC TAAATTAACC TTCTCCCATA TGTCATCTAA 
    AAACAATACA AATCTCTTTT TCCTTAAGAA ATTGTATAAA TAAACGCCCT 
    TTTGGTATTT ATATTTTGTG TCCCACTTCT CTCCACTAAT ATGAACTTTC 
    TGAGCGATTT CATCTAGAAT ATTCTCTACA TTCATCTCAC TCG

AT1G63350.1

Model type
Protein coding
Short Description
Disease resistance protein (CC-NBS-LRR class) family
Computational Description
Disease resistance protein (CC-NBS-LRR class) family; FUNCTIONS IN: ATP binding; INVOLVED IN: N-terminal protein myristoylation, defense response; LOCATED IN: cellular_component unknown; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing protein (InterPro:IPR015766), NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT1G62630.1); Has 18724 Blast hits to 16763 proteins in 698 species: Archae - 14; Bacteria - 926; Metazoa - 3029; Fungi - 209; Plants - 14107; Viruses - 4; Other Eukaryotes - 435 (source: NCBI BLink).
Link
InterPro Scan - TAIR