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Mutant Lines
ET12957

ET12957

CSHL Arabidopsis genetrap mutant lines

Original: ET12957

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET12957

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

3 prime edge [+] show sequence

Chromosome: 4; Position: 17909936 [Map]; Strand: w
- AT4G38180.1 - [+] show detail - FAR1-related sequence 5
  Distance: -259; Region: promoter
- AT4G38190.1 - [+] show detail - cellulose synthase like D4
  Distance: 0; Region: exon3 (3UTR)

GTAGAGGTAT TTTACCGACC GTTACCGACC GTTTTCATCC CTAATGACTG 
TATAAATCAG CCTTTGTATC AATCATTTCG TCTTTAAAAG TCAATTTTTC 
CTCTCCTCCA CTCGCAACTG ATAGTGAACC ATACGGTAAG CGTAAAAGAG 
GATGGGCCTT ATAAAGTAAA TGAAGAGGGA GTGGGCCTTA TAAAATTATA 
AATGAAGAAG GAATGGGCCT TATAAAATAA ATGAAGAAGG AATGGGCCTT 
GCTTAAATTA AAAAAAGAGA ATTAGAAGCA CCGTCTGTCT TCCTCCTCCG 
TGCCCTCCGA CGACTCTATT CCCAGTCTCC CTCCTCCGTC GTCTCTCATC 
TTCCTTTTCA TTCTTCGGTT ATTATAACGT AATCAATTAC AAGTTCCCTT 
ATCTCTTCTA TTCTGGTTTC TCCCGCGCAC GAACGCGCAT TCCCTCGTCT 
TCGCTGCCTC CCAATCTCAA TCTCAGACTT GAAATCAAAT CACGACTGTA 
AGTGGTTCTA TCTACAGTAG CTAGCT

5 prime edge [+] show sequence

Chromosome: 3; Position: 2335815 [Map]; Strand: c
- AT3G07330.1 - [+] show detail - Cellulose-synthase-like C6
  Distance: 0; Region: exon5 (3UTR)

CCTACTTTCT CCCTAGGAGA GGATCCAAAG ACTTGCCTAC CTGTCTTTGT 
TGTGGTATTA AGCCAAACCT TGGTTTTTTG TTGTGCAAAA ATTGTTGTTA 
GGTTGTTGGT TTTTTGTTTC GGATGATGTG GCAGAAACAT ATTTTAAGCT 
TTGCTCTAAT GCCACTCTCA AATTCTTTGT TGTTGTTGTT GTTTCTCTCC 
TAAGGGTTCA TTTATTTATA TACACACTTC TGAATTGAAA TGTACCATTT 
CTTTTTTAAA TCTGTTGTCT TCATCTTTTA GTATTTGTTA TGCTAATTTT 
GGGCCTCTTC TATCTTAAGT TATAAGGACC AGAATCTGTT TGACAATCTC 
TTATATGATT TAAGGCCCAA TTTCCCTCAG TTCTCTTAGA TCAAGCACAA 
ATGATTCGAG TTTTGTGATT GAATTTATAC GGGGAACTTT TTTTCCATAA 
AAAGTCAAAA CACAGATGTT AAAAATTGTC CGACTGCAAA ATGTATAATG 
TACAAACATA TGACATATGT TTCGACCTAA CAAGTCTATT GCATGTATTC 
CTGCCTCGGA GGGCGTAAAC CCAGATAAAT CATTGCAGAC TTGAAAGAAA 
ATCGTTGATA AAAAACACTG TCGAAAATAA CTTATCAA

AT3G07330.1

Model type: Protein coding
Short Description: Cellulose-synthase-like C6
Curator Summary: encodes a gene similar to cellulose synthase
Computational Description: Cellulose-synthase-like C6 (CSLC6); FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: pollen tube development; LOCATED IN: Golgi apparatus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 2 (InterPro:IPR001173); BEST Arabidopsis thaliana protein match is: Glycosyl transferase family 2 protein (TAIR:AT2G24630.1); Has 4986 Blast hits to 4983 proteins in 1463 species: Archae - 182; Bacteria - 3875; Metazoa - 9; Fungi - 97; Plants - 510; Viruses - 14; Other Eukaryotes - 299 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G38180.1

Model type: Protein coding
Short Description: FAR1-related sequence 5
Computational Description: FAR1-related sequence 5 (FRS5); FUNCTIONS IN: zinc ion binding; INVOLVED IN: response to red or far red light; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: MULE transposase, conserved domain (InterPro:IPR018289), Transcription factor, FAR1-related (InterPro:IPR004330), Zinc finger, PMZ-type (InterPro:IPR006564), Zinc finger, SWIM-type (InterPro:IPR007527); BEST Arabidopsis thaliana protein match is: FAR1-related sequence 3 (TAIR:AT2G27110.2); Has 1793 Blast hits to 1580 proteins in 47 species: Archae - 2; Bacteria - 0; Metazoa - 4; Fungi - 136; Plants - 1646; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G38190.1

Model type: Protein coding
Short Description: cellulose synthase like D4
Curator Summary: encodes a gene similar to cellulose synthase
Computational Description: cellulose synthase like D4 (CSLD4); CONTAINS InterPro DOMAIN/s: Cellulose synthase (InterPro:IPR005150); BEST Arabidopsis thaliana protein match is: cellulose synthase-like D3 (TAIR:AT3G03050.1); Has 3503 Blast hits to 2866 proteins in 674 species: Archae - 22; Bacteria - 1611; Metazoa - 5; Fungi - 10; Plants - 1761; Viruses - 2; Other Eukaryotes - 92 (source: NCBI BLink).
Link: InterPro Scan - TAIR