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ET12969

CSHL Arabidopsis genetrap mutant lines

Original: ET12969

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET12969

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 26260214 [Map]; Strand: w
      • AT1G69780.1 - [+] show detail - Homeobox-leucine zipper protein family
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: ET12969 - 5-prime edge 
    TTCCATCCTA CTTTCTCCCT GCTTGCAGTA ACATAAGTGA TAACAGTTCA 
    GATAATCTCA GACTAGATAT CTCAACTGCG CCGCCATCAA ACGACAGTAC 
    ATTAACCGGT GGCCACCCAC CGCCACCACA GACAGTTGGT CGACACTTCT 
    TCCCACCGTC GCCAGCCACC GCAACGACAA CTACTACAAC AATGCAGTTC 
    TTTCAAAACT CATCTTCAGG ACAGAGTATG GTTAAAGAAG AGAATAGTAT 
    CAGTAACATG TTCTGTGCAA TGGATGACCA TTCTGGTTTT TGGCCATGGC 
    TTGATCAGCA ACAGTACAAT TGAAATTGGT CTACCTGTTT TTTTTGTTTT 
    TGTTTTTAAA AAAATTTATA TTTTTTTTTG GAATTGGGAA TTTTAATCAA 
    AAAAACCCAG GCTGGTTTTC AAA

AT1G69780.1

Model type
Protein coding
Short Description
Homeobox-leucine zipper protein family
Curator Summary
Encodes a homeodomain leucine zipper class I (HD-Zip I) protein.
Computational Description
ATHB13; FUNCTIONS IN: sequence-specific DNA binding, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: cotyledon morphogenesis, regulation of transcription, DNA-dependent, response to sucrose stimulus, leaf morphogenesis; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Helix-turn-helix motif, lambda-like repressor (InterPro:IPR000047), Leucine zipper, homeobox-associated (InterPro:IPR003106), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 23 (TAIR:AT1G26960.1); Has 11763 Blast hits to 11710 proteins in 595 species: Archae - 0; Bacteria - 0; Metazoa - 9272; Fungi - 193; Plants - 2061; Viruses - 5; Other Eukaryotes - 232 (source: NCBI BLink).
Link
InterPro Scan - TAIR