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ET12976

CSHL Arabidopsis genetrap mutant lines

Original: ET12976

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET12976

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 19240213 [Map]; Strand: c
      • AT2G46810.1 - [+] show detail - basic helix-loop-helix (bHLH) DNA-binding superfamily protein
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: ET12976 - 3-prime edge 
    AACGGTAGAG GTATTTTACC GACCGTTACC GACCGTTTTC ATCCCTACCC 
    TTAAAGCCAA GGCATCGACA ATTACATGTT TAGCAGATAA GAAGCCTCAA 
    TTCACGGGTT AACGAAATAA GAGACTTCAA AAGATTCAAT TTTTATCTAT 
    TGGGTTGTAA CAAAAATCAA GCTTTTCATG AAATGTAAGA ACACAAAACC 
    AATGGAAACT CTCTTCTCTT CTACTTCTTC TTCTTCATCA TCATCTTCCG 
    TGTGTTAACA GAAGTCCCCA CAATTGTCTG TCTTCGCTGC GAGACAAAAC 
    TGCCACAGCC AATAATGTTT CTCTGAGGGA CCTTGCTTCT GTCAGAGACT 
    CGCTCTCTCT CTCCTCTTCT TGCTCTGCTC AGCTCTCTCA CCAACTCATC 
    TTCAGTCCTC AAACAAACAT CTGTTCTCAT CTTTGTTTTC TTTCCTTTCT 
    TTCTCATATC TCATTTTCAA TTTTCCCAAT TTCTCTTC

AT2G46810.1

Model type
Protein coding
Short Description
basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Computational Description
basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT3G61950.1); Has 1496 Blast hits to 1481 proteins in 142 species: Archae - 0; Bacteria - 20; Metazoa - 45; Fungi - 33; Plants - 1336; Viruses - 0; Other Eukaryotes - 62 (source: NCBI BLink).
Link
InterPro Scan - TAIR