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ET12984

CSHL Arabidopsis genetrap mutant lines

Original: ET12984

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET12984

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 21376425 [Map]; Strand: w
      • AT1G57710.1 - [+] show detail - pre-tRNA
        Distance: -2036; Region: intergenic
      • AT1G57720.1 - [+] show detail - Translation elongation factor EF1B, gamma chain
        Distance: -1190; Region: intergenic
    Flanking Genome Sequence: ET12984 - 5-prime edge 
    TACTTTCTCC CTGTATGGAT GTGAACAATT GGTATTATTT TACAATAATA 
    GTAAAAAAAA CATGAACTTA CAAATTACAA ACCAAACTTG AAAAAAAACA 
    TGATATATGC ATGCTCTTTG AGATCATCAC ACGAGTTGGT CGGAGCCACC 
    TTTCGCAGTC TTGTCTGCTT CGGCTGGTCC ATGTTTTTTC TCGGCTTTAC 
    TATCTGCGAT TCTCTCTCGA GGGCTACACA AGATTCTTCC CAGAAAATGG 
    GAAGCAATTG CCAAGAATAT GATCACTATG ACGATCAAAC ACCATTGCCA 
    GATTGGAACC TCCATATCTT TAGTTTGGAT TTTTGGTCAC ACAAAGTAAA 
    CGCAGTGCAG AAGAAGAAGA GGCGGATTAT GCTTGAAATT AAAGTTGTTG 
    GTACTGTTGA CCAAAAGGAG TAAGTTGTGA AGAAATGATA CGCAAAGACT 
    TGTGG

AT1G57710.1

Model type
Pre-tRNA
Short Description
pre-tRNA
Computational Description
tRNA-Undet (anticodon: ???)
Link
InterPro Scan - TAIR

AT1G57720.1

Model type
Protein coding
Short Description
Translation elongation factor EF1B, gamma chain
Computational Description
Translation elongation factor EF1B, gamma chain; FUNCTIONS IN: copper ion binding, translation elongation factor activity; INVOLVED IN: response to cadmium ion, response to zinc ion; LOCATED IN: cell wall, plasma membrane, vacuole, membrane; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: seedling growth, seed development stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Translation elongation factor EF1B, gamma chain, conserved (InterPro:IPR001662), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Translation elongation factor EF1B, gamma chain (TAIR:AT1G09640.1); Has 10185 Blast hits to 9750 proteins in 1401 species: Archae - 0; Bacteria - 5136; Metazoa - 1722; Fungi - 558; Plants - 845; Viruses - 5; Other Eukaryotes - 1919 (source: NCBI BLink).
Link
InterPro Scan - TAIR