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ET12988

CSHL Arabidopsis genetrap mutant lines

Original: ET12988

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET12988

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 1139913 [Map]; Strand: c
      • AT2G03730.2 - [+] show detail - ACT domain repeat 5
        Distance: 0; Region: exon1 (5UTR)
      • AT2G03730.1 - [+] show detail - ACT domain repeat 5
        Distance: 0; Region: exon2 (5UTR)
    Flanking Genome Sequence: ET12988 - 3-prime edge
    CGGTAGAGGA TTTTACCGAC CGTTACCGAC CGTTTTCATC CCTAGATGGA 
    ATTGTCTCTG GTGGAAGAAG AAGAGGAAGA CTTTGCAACT GAAATTGCCA
    GAGAAGAAGA AAGTTTGTTA ATTTATATAT ATAACGAAGA AGAAAGAGAA
    GAGAAGAGAT TATTAAATTG AGAAAAACAG AGTGAGAGAG AGAGAGATCG
    AAGAAATGAG AAAAATTACT CAGAGTGTGG TGTGTCTGAC ACAAATTTAG
    CCGACACGAT TCTCCTCAAA ACCAGCAAAG AAGAGAGAAA GAGTCCACAC
    ACAATTTTTT GTTGTTGTAT TTGTGATGAG GAATGAGGAG GATTCTACTC
    ATAAATACCC GATGCGCACG TTAGCAGCCG CCCTCTTCTT TTTATCAGGG
    TTATTGAACC GGTTTTATCC CGGTTTAGGA GATTCATCTT AATTAAGTAG
    TAGATTATAG ACAGCACTAT TATAAACCGG TTTTATCCCG GTTTAGGAGA
    T

AT2G03730.1

Model type
Protein coding
Short Description
ACT domain repeat 5
Curator Summary
Member of a small family of ACT domain containing proteins. ACT domains are thought to be involved in amino acid binding.
Computational Description
ACT domain repeat 5 (ACR5); FUNCTIONS IN: amino acid binding; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Amino acid-binding ACT (InterPro:IPR002912); BEST Arabidopsis thaliana protein match is: ACT domain repeat 4 (TAIR:AT1G69040.2); Has 2794 Blast hits to 1588 proteins in 427 species: Archae - 0; Bacteria - 1672; Metazoa - 0; Fungi - 0; Plants - 582; Viruses - 0; Other Eukaryotes - 540 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G03730.2

Model type
Protein coding
Short Description
ACT domain repeat 5
Curator Summary
Member of a small family of ACT domain containing proteins. ACT domains are thought to be involved in amino acid binding.
Computational Description
ACT domain repeat 5 (ACR5); FUNCTIONS IN: amino acid binding; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Amino acid-binding ACT (InterPro:IPR002912); BEST Arabidopsis thaliana protein match is: ACT domain repeat 4 (TAIR:AT1G69040.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR