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ET12990

CSHL Arabidopsis genetrap mutant lines

Original: ET12990

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET12990

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 5497861 [Map]; Strand: c
      • AT5G16730.1 - [+] show detail - Plant protein of unknown function (DUF827)
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: ET12990 - 5-prime edge 
    CCTACTTTCT CCCTGAAGAG TCTTACTTAG TCTTCGAAGC CATAACCGTC 
    GATCGCTGTC ACCGTCGCCA CCACCGTCGC CACCACCGTC GCGCTCAGTT 
    GATCAGAAAT TCGATTGATA ATTTTGCTGG AATTGGGACT CAATTTTCAG 
    ATCAAGAAAG AGAGAGAGAA TGATTCGAAT CGGTGGGATC GAAGTAACGG 
    AGAATGATAT AGATAATGGC AGGTGTGGTT GTCTCCAGAG TGGCCTCACT 
    AACTCGTTAA AAAGAAGCTT ATTTATTCTG CTACCGATCC GATGTATAAA 
    AACAAAGAAA CCACTAATAA TCTAGCTTCA TTAAATAATG GTAAAATAGA 
    AATTAAGAGA ACGTGAAGGT TGGTAAAATG ACGATAATGA CCCACACTCT 
    TCTTTTGTCC AATCAAACTG ACAGCGAAAC TACCGTCACT CTCTTCTTCT

AT5G16730.1

Model type
Protein coding
Short Description
Plant protein of unknown function (DUF827)
Computational Description
LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF827, plant (InterPro:IPR008545), Spectrin/alpha-actinin (InterPro:IPR018159); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF827) (TAIR:AT3G02930.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR