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ET12992

CSHL Arabidopsis genetrap mutant lines

Original: ET12992

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET12992

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 40606 [Map]; Strand: c
      • AT4G00110.1 - [+] show detail - UDP-D-glucuronate 4-epimerase 3
        Distance: -417; Region: promoter
    Flanking Genome Sequence: ET12992 - 3-prime edge 
    TGAAACGGTA GAGGATTTTA CCGACCGTTA CCGACCGTTT TCATCCCTAC 
    ATTTATCCAT GGGGTACAAA AAAGCAAAGA GTAATCTTCA AGGAATAATA 
    TAATAACAAC ACGCATCTAC TAGACCGCAT ATATAATAGT AATATCCATC 
    AAAGCTCTAT TTTATTCTTC AAATTCACTT ATTGTAAGAT AAAAACATAA 
    CGATATTGAT TTATAGTGAC TAGTGAGTGA GTCCGGGTAA TGTATGTGGA 
    AAGGCACACT TGAACAACGT AGAAAATGTC TTTATGATGT GTAAAAGAGA 
    GCTTAGCTTA ACAAAAGTCT TTAGCGGCTG CAATAACCGT ATCCACGGTG 
    AGTCCAAATT TCCTGTAGAG CACATTGGCT GGTGCACTTG CTCCAAAACT 
    GTCTACGCCG ATGGCTTTTC TTTTGGAGCC AACCATCTTC TCCCACCCAA 
    AGGTCGACCC TGCTTCAATG CTCACTCTTG CTGAAACCTC TCAAGGTAAC 
    ACACTTTCTT TGTATTCTTC TCTTTGTTCA TCAAACAGCT CCCAACTCAC 
    CAATGACACT ACTCTCACTG CTTTTCT

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 40550 [Map]; Strand: c
      • AT4G00110.1 - [+] show detail - UDP-D-glucuronate 4-epimerase 3
        Distance: -361; Region: promoter
    Flanking Genome Sequence: ET12992 - 5-prime edge 
    CTTTCTCCCT GGATAAATGT GCCTTGGTAT TAAGTTGCAA ATTTGATTTA 
    ATTAATCCCT AAACATGTTA CTAGTTAGAG TTTGCACGTG ACGATCTTGG 
    GCAGCACCTA AACATGTATT TGTGTGCGTA ATTTTGTAAT AAGTAAGTGC 
    ATCGAGTTTG ATGAATCAGT ATTTGAATGA TAATTCGATG AAAGTACATT 
    TGTTGCCATA AGAACCCTAA AGTAAGATCC ATAAGGATGA TGAAAGCTTC 
    ATTAATAATA AAAGTAAAGT TAATCTACCT ATAATAACTA AATTAATCAA 
    GAGTGAAACT AAATCTGTAG AAAATTAAAT GTAAGAGATA GAGACTAGAG 
    TGATTAATTA AGCTTTGACT ATCCCTTAAA TCCTCATAAT CTCTTCTTGC 
    TCTTTGACCA TCTTC

AT4G00110.1

Model type
Protein coding
Short Description
UDP-D-glucuronate 4-epimerase 3
Curator Summary
Encodes a putative membrane-anchored UDP-D-glucuronate 4-epimerase.
Computational Description
UDP-D-glucuronate 4-epimerase 3 (GAE3); FUNCTIONS IN: UDP-glucuronate 4-epimerase activity, catalytic activity; INVOLVED IN: cellular metabolic process, carbohydrate metabolic process, nucleotide-sugar metabolic process, metabolic process; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040), Nucleotide sugar epimerase (InterPro:IPR008089); BEST Arabidopsis thaliana protein match is: UDP-D-glucuronate 4-epimerase 2 (TAIR:AT1G02000.1); Has 43399 Blast hits to 43389 proteins in 2971 species: Archae - 792; Bacteria - 26013; Metazoa - 773; Fungi - 412; Plants - 1214; Viruses - 37; Other Eukaryotes - 14158 (source: NCBI BLink).
Link
InterPro Scan - TAIR