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ET12993

CSHL Arabidopsis genetrap mutant lines

Original: ET12993

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET12993

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 5497825 [Map]; Strand: c
      • AT5G16730.1 - [+] show detail - Plant protein of unknown function (DUF827)
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: ET12993 - 5-prime edge 
    GAAGCATAAC CGTCGATCGT TGCCACCGTC GCCACCACCG TCGCCACCAC 
    CGTCGCGCTC AGTTGATCAG AAATTCGATT GATAATTTTG CTGGAATTGG 
    GACTCAATTT TCAGATCAAG AAAGAGAGAG AGAATGATTC GAATCGGTGG 
    GATCGAAGTA ACGGAGAATG ATATAGATAA TGGCAGGTGT GGTTGTCTCC 
    AGAGTGGCCT CACTAACTCG TTAAAAAGAA GCTTATTTAT TCTGCTACCG 
    ATCCGATGTA TAAAAACAAA GAAACCACTA ATAATCTAGC TTCATTAAAT 
    AATGGTAAAA TAGAAATTAA GAGAACGTGA AGGTTGGTAA AATGACGATA 
    ATGACCCACA CTCTTCTTTT GTCCAATCAA ACTGACAGCG AAACTACCGT 
    CACTCTCTTC TTCT

AT5G16730.1

Model type
Protein coding
Short Description
Plant protein of unknown function (DUF827)
Computational Description
LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF827, plant (InterPro:IPR008545), Spectrin/alpha-actinin (InterPro:IPR018159); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF827) (TAIR:AT3G02930.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR