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ET12994

CSHL Arabidopsis genetrap mutant lines

Original: ET12994

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET12994

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 368906 [Map]; Strand: c
      • AT5G01950.1 - [+] show detail - Leucine-rich repeat protein kinase family protein
        Distance: 0; Region: intron4 (CDS)
    Flanking Genome Sequence: ET12994 - 3-prime edge 
    AAACGGTAGA GGATTTTACC GACCGTTACC GACCGTTTTC ATCCCTAATC 
    TCTTCATAGA TGCCACACGA AAGAAATATT AGACAGTCAG TAGTGTAACC 
    AAAATATAGG GCGTTCCAAA ATAAACACTT TGCAAAGCTT TACATGTTGA 
    AACTTACAAT ATTTCGAGAT GAGCTAATTT TTGGAGCTCT GGTGACAAAG 
    TCCCGGAGAG ATTCATATTC ATCAGCAGGC TGCTTGGCAA TAAAAGGAAG 
    GATCAGGGAA GGAATATCTG GTCATGTAAG CAACTGTTCC GAGAAAAGAG 
    AAAAAAAAGA CAACTGAACC AGCTTCTCCC AAAAGTAAAG CCTTTTAGTT 
    AACTCCAGCA TATATACAAG CAGACTAACA GCGAAAGCAA GAAGGTACAT 
    AAGAAGAAAA AAAAGAAGCA AATTCATACA GTTCTCGGAC ATGCAGGTAG 
    TCGTCAGTAC CAATCTCATT AAAGCAGATA ACTCCAGTCC AATTTGATCT 
    ACAAGGGTCA CCTCTATTCC AGTTTCTCAA ATAATCTTTA GGGTCAAGTA 
    GACTTCTTTT AACAGATCGT AAAGCAGTGA CTTCTGAAGG GTGGGTTCTT 
    TGAGCATGGG CAAGCAGAAG GACGCAACAA CAGGCAACAA GGAGCGCATG 
    TAGATAGAGT CTTTGAGGGA ACACCATGGT GCCTTTGGAA AGCGTAACAG 
    CGTAGGAAGC AGATAAATAT AGACT

  • 5 prime edge [+] show sequence

    Not mapped

    Flanking Genome Sequence: ET12994 - 5-prime edge 
    TTCCTCCTAC TTTCTCCCG

AT5G01950.1

Model type
Protein coding
Short Description
Leucine-rich repeat protein kinase family protein
Computational Description
Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: chloroplast, plasma membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT1G06840.1); Has 195622 Blast hits to 137374 proteins in 5075 species: Archae - 144; Bacteria - 18537; Metazoa - 60927; Fungi - 10261; Plants - 82888; Viruses - 345; Other Eukaryotes - 22520 (source: NCBI BLink).
Link
InterPro Scan - TAIR