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ET12996

CSHL Arabidopsis genetrap mutant lines

Original: ET12996

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET12996

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 22367484 [Map]; Strand: w
      • AT3G60520.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: -4905; Region: intergenic
      • AT3G60530.1 - [+] show detail - GATA transcription factor 4
        Distance: -5731; Region: intergenic
    Flanking Genome Sequence: ET12996 - 3-prime edge 
    AAACGGTAGA GGTATTTTAC CGACCGTTAC CGACCGTTTT CATCCCTAAA 
    GACAGAACAT GTGTCGGACA TAAGAAGTAC AGAAAACACA AACGGCGTCG 
    TATAAGCTAG TAGCCTTTTG GAATGGTGAG TTGATGTGCG TTGGAAATAC 
    CCGGCAAAGC CAAAATTTTG AATTGGGCCG TCATATCTAA ATCATAAGCC 
    CATTTAGAAA AGATCTATCC ATTATGGACG TAAGTACAGT ATGTAACAGA 
    TGACAACGCC GTATATTCGA TCGTACATCA AATAAAAGTA ACAGTCCATG 
    TTCATAACGC ATACATTGAT ACTCCATAAC ATCATTCACG AATTTTTCTT 
    TGTTTTTGCT AAAATACAAC TTTTTACTGA ATCAACTTTT ATTACGGGAC 
    AACCCAATAA TACTCTGCAG GTTAATTTAT GATTAATCAA ATCAATTTTT 
    TTGTACGTTA AGGTTGATTA ATCAATTTTA GATTTTTCTG AGATTTTTTC 
    CTGGAATATC TATCGAAGAC AGAAGAATTG ATGGTGTCAA TTGCTTACTG 
    AGGGAGATGG TGACAGGTGG ATGTGAGTCC CACTCCCACA AAGAATCGGG 
    TGAACGGTCG CTACTATTTG GCCGGACCCA TTTCATCGCC GATTCGAGCC 
    ACGAAGAGAC ACTACAAGAG AAC

AT3G60520.1

Model type
Protein coding
Computational Description
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G02070.1); Has 107 Blast hits to 107 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 107; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G60530.1

Model type
Protein coding
Short Description
GATA transcription factor 4
Curator Summary
Encodes a member of the GATA factor family of zinc finger transcription factors.
Computational Description
GATA transcription factor 4 (GATA4); CONTAINS InterPro DOMAIN/s: Zinc finger, NHR/GATA-type (InterPro:IPR013088), Transcription factor, GATA, plant (InterPro:IPR016679), Zinc finger, GATA-type (InterPro:IPR000679); BEST Arabidopsis thaliana protein match is: GATA transcription factor 2 (TAIR:AT2G45050.1); Has 1515 Blast hits to 1478 proteins in 168 species: Archae - 0; Bacteria - 0; Metazoa - 43; Fungi - 592; Plants - 818; Viruses - 0; Other Eukaryotes - 62 (source: NCBI BLink).
Link
InterPro Scan - TAIR