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ET13001

CSHL Arabidopsis genetrap mutant lines

Original: ET13001

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13001

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 2357157 [Map]; Strand: c
      • AT1G07640.3 - [+] show detail - Dof-type zinc finger DNA-binding family protein
        Distance: -930; Region: promoter
    Flanking Genome Sequence: ET13001 - 3-prime edge 
    TTTTACCGAC CGTTACCGAC CGTTTTCATC CCTAATGGCA AGCCCCATAT 
    GCCATATATA AAGCACATCA TCATCATTCT CTATTACACT TTTGGTGGGA 
    TCTTGTCTAT TATGCAATGG TGTAAATTAA TCTCTCTCTT TTCTGCATTC 
    AGTAGCATCA GTGTCAGATT TAACAGCATG TCATCATAGA TAGTAGTTTC 
    TATAACTTAA AAAAAAAAGT TTGGTAATTC TATTCTACCT TTGAAGTTTG 
    AACCAATTAA GGATATTCGC TTCACCTTAA GAGAGGGGTG TGGAGGTGTG 
    TTTAACGTTT GTTTACATAA AAAATCATGA ATGTGTAGTT AATATTAGGA 
    ATGCACAAAT TTATTTAAAA AATTACAACT ATTCTATTTA GACGAAGGGA 
    TGAACATTTA TAATTTATCT AACGATTTTT CCTAATATTT TTATTTTATG 
    GAAACGAAGA AAATCCAA

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 2357057 [Map]; Strand: c
      • AT1G07640.3 - [+] show detail - Dof-type zinc finger DNA-binding family protein
        Distance: -830; Region: promoter
    Flanking Genome Sequence: ET13001 - 5-prime edge 
    TTATAAAGAA TAAATATGAT AAGAAATTAT TTCTTTTTAT AAGCTTAATT 
    TGCTCCAATA ATAACACATC CATCTTTTCT ATTAGACACT AATTCGTTTT 
    TTTTTTACAG AAATGTATCT AGAGAGAGGC CCTTACTTAA GAAAAAGAGG 
    AAGAGAGGGA TATAAGTTGA GTGTTTGGTG GGGGTGAGCT TCCATAAGGA 
    ATAAACGGCC GTTTGGGCTT AAGATTTCGG AGAGGATTTA AATTTTGGGA 
    TTAAAGGATT TCTGAAT

AT1G07640.3

Model type
Protein coding
Short Description
Dof-type zinc finger DNA-binding family protein
Curator Summary
A member of the DOF transcription factors. Prominently expressed in the phloem of leaves and other organs. Expression is induced by wounding, MeJA and insect feeding. Upregulates glucosinolate biosynthesis.
Computational Description
OBP2; CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: Dof-type zinc finger DNA-binding family protein (TAIR:AT2G28810.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR