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ET13004

CSHL Arabidopsis genetrap mutant lines

Original: ET13004

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13004

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 748550 [Map]; Strand: w
      • AT2G02680.1 - [+] show detail - Cysteine/Histidine-rich C1 domain family protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: ET13004 - 3-prime edge 
    TATTTTACCG ACCGTTACCG ACCGTTTTCA TCCCTAGACG TTTTACTTGA 
    TTTTTCTTTT GGTTTGGTTA CCGATCGATG ATCCTGATAC AAAAAATTAC 
    AACTATAAAA GTTTATTTCT TTTTAGTTCG GGTTTCTATA ATTATTTTGG 
    TTTGGTTACG ATCACCTCAA TTGGAATGGA CATCTCAACA TGACAACATG 
    TGCTTTGTGA GTGAGAATTT GTCTTGAAAA ATAAAAGACC TTGCAACCAA 
    AACCGTTTTG ACTTTTGAAA TTTTAGTTAA ACGCTACGGC TTGCCGCTTG 
    CATAAAAAAT GGGTGCCATT TAATTGTTTG GGAATTGTTT TTCATCTGTG 
    TTTTTT

AT2G02680.1

Model type
Protein coding
Short Description
Cysteine/Histidine-rich C1 domain family protein
Computational Description
Cysteine/Histidine-rich C1 domain family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: intracellular signaling pathway; LOCATED IN: intracellular; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Protein kinase C-like, phorbol ester/diacylglycerol binding (InterPro:IPR002219), DC1 (InterPro:IPR004146), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, RanBP2-type (InterPro:IPR001876), C1-like (InterPro:IPR011424); BEST Arabidopsis thaliana protein match is: Cysteine/Histidine-rich C1 domain family protein (TAIR:AT2G02690.1); Has 1749 Blast hits to 685 proteins in 46 species: Archae - 0; Bacteria - 0; Metazoa - 43; Fungi - 10; Plants - 1682; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink).
Link
InterPro Scan - TAIR