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ET13020

CSHL Arabidopsis genetrap mutant lines

Original: ET13020

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13020

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 16702975 [Map]; Strand: w
      • AT3G45530.1 - [+] show detail - Cysteine/Histidine-rich C1 domain family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: ET13020 - 3-prime edge 
    ATGAAACGGT AGAGGTATTT TACCGACCGT TACCGACCGT TTTCATCCCT 
    AGATGCCGTG GCACCACCAC CCTCTATTCA TGGATAATTT TGCGACCAAT 
    ATGACTTGCG ATGTTTGTTA TGACAACCAC GTAGATGGCT ATATCTGTCT 
    TTGCTGTCGG TTGTTCGTTG GGTGGGTATG CGCTCACAAC GTAATTGACT 
    CACCAGAGAT CACTCATCCT TGTCACGCCA AACACCCTCT CAAGCTTCTT 
    ACCGAAGGAG CTCCCGCTTA CACTGATCCA AAATGTCATT TATGTGGAGA 
    AGACACTGGA AAATTCATCT ATCATTGTGA TATCTGTAAG TTCAATTTGG 
    ATTTGGTATG CGCAAAAACA AAACCCCCAC CAGTTGCTCT T

AT3G45530.1

Model type
Protein coding
Short Description
Cysteine/Histidine-rich C1 domain family protein
Computational Description
Cysteine/Histidine-rich C1 domain family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: intracellular signaling pathway; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Protein kinase C-like, phorbol ester/diacylglycerol binding (InterPro:IPR002219), DC1 (InterPro:IPR004146), Zinc finger, PHD-type (InterPro:IPR001965), C1-like (InterPro:IPR011424); BEST Arabidopsis thaliana protein match is: Cysteine/Histidine-rich C1 domain family protein (TAIR:AT3G27473.1); Has 1872 Blast hits to 663 proteins in 29 species: Archae - 0; Bacteria - 0; Metazoa - 16; Fungi - 0; Plants - 1850; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).
Link
InterPro Scan - TAIR