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ET13021

CSHL Arabidopsis genetrap mutant lines

Original: ET13021

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13021

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 10634429 [Map]; Strand: w
      • AT3G28390.1 - [+] show detail - P-glycoprotein 18
        Distance: -462; Region: promoter
    Flanking Genome Sequence: ET13021 - 3-prime edge 
    TTTTACCGAC CGTTACCGAC CGTTTTCATC CCTACCTTCA ATGAATACAA 
    GTATTTTGTA CACACAAAAA AACTACTCCC TCGGTTTTTA TTTATTCAAA 
    ATGTTAAAAG TCAATAAATG GATTTGTAAT TTTCTTAAAT ATTACGTTTT 
    TCATTTTCAT AATGTGCAAA TACTCTAAAA GTAAAGTGAA TAAACAATTA 
    CTATAGAGTA TTTGATGGTA TAAATCACGG TAATCACGCA TCTCATAATA 
    ATACAAATTA ATGTTTCATA CATATTAAAA GACCAACGGT CTCCCTTTGT 
    CTCACAAACA GCCAGGAAGA CGTGAACGAA CAACATAACA TGATAAAATT 
    AAATACTCTA ATTGTTTCCT CTTTAATATA ACCGCAAGAG GAGAGAACCT 
    TTTGCTCTTC AAGAAAAGGA GAGAAGACTG CAAGCTGTCG TTTCCCTAAT 
    TAAGGTCAAG GTTTCGTTTT TGTATTTTCT CTGAAATAGA AAGGAAAAGA 
    TTACGTGGAG GGACAAGATG AAGAGTTTTG GAAGCATAAG ATC

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 10634957 [Map]; Strand: w
      • AT3G28390.1 - [+] show detail - P-glycoprotein 18
        Distance: -990; Region: promoter
    Flanking Genome Sequence: ET13021 - 5-prime edge 
    TTTCCATCCA CTTTCTCCCT GATTGAAGGA ACAAATACAA AGAGAATGAG 
    GGATCAACGA TCCAAAGTTT AAAACTCAAA GGATAAGGGC ATTCTCCAAT 
    GCCACAGAAA ACGATTCAAC AAAGTTTCAT GAGAGCTTTG AGACAAATGC 
    TAGAATGTAT TACATTTACA CTCATTTTTT TACTTGTTCT TTTATATATA 
    TACCCATTTT CTATTTTCAA ATACCAACTT TACCAATTTT TAGTTACCTA 
    AACAAATCGC CATTCCTTTT CGGTCTGGAC ATTCGGATAT GCGGATCGGG 
    TTCAGTAAAA CCCGATCGGG TAAGGGTATG TCGGGTATGG TAGTCTAGGA 
    CCCAAGAAGG TAAATTGAAA ATATCGGTTC GGGTTTGGTT CAGGTCTAGT 
    CAGATTCGGA ATTGAGATTT GAGAACCGTA AAAAAACCCG AGAAATTACA 
    GTTCTTCGTT GGGTTCGGGT CGGGATCGGT TTTTTTGCCC TATTTACTCT 
    ATGAAATCAA TTTTTACCCT ACT

AT3G28390.1

Model type
Protein coding
Short Description
P-glycoprotein 18
Computational Description
P-glycoprotein 18 (PGP18); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; INVOLVED IN: transport, transmembrane transport; LOCATED IN: integral to membrane; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: P-glycoprotein 17 (TAIR:AT3G28380.1); Has 821159 Blast hits to 385866 proteins in 4148 species: Archae - 14469; Bacteria - 641805; Metazoa - 17559; Fungi - 12131; Plants - 9466; Viruses - 43; Other Eukaryotes - 125686 (source: NCBI BLink).
Link
InterPro Scan - TAIR