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ET13031

CSHL Arabidopsis genetrap mutant lines

Original: ET13031

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13031

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 18177777 [Map]; Strand: c
      • AT1G49140.1 - [+] show detail - Complex I subunit NDUFS6
        Distance: 0; Region: intron1 (CDS)
      • AT1G49150.1 - [+] show detail - unknown protein; Has 6 Blast hits to 6 proteins in 2 species: Archae - 0; Bac...
        Distance: -800; Region: promoter
    Flanking Genome Sequence: ET13031 - 3-prime edge 
    TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC TATATGATTA 
    TATCTAAAGG AAGAATCAAT TTCACAAAGA GGTACTAATG AAGAATCTGA 
    GACCAATCTG CATCAAATTC AAATCCAATT CAATCAAAGA CACTAAAGAG 
    TAACTGAATT CAAAATTCAA AGGTTAAGGA AAAAAAAACG AAACCCTAAG 
    AATTTCAATC GAAGCATTTT CACCAGTGTG AGAGAGAAAG CCGGGAAAAA 
    AACTCACCGT GAAGAGAGAT AGGACGGGGG TCTTTGCCCC AACCAACGCC 
    GCGAGTGGCG TCGAGATACT GCTGAACAAG ATGACGACAC TTCTGGTAAT 
    GGTTAACGCC TTCGACGCGG TAACACCATT TGACCTTCTC ACGTAAGATC 
    TTAGCCTTCT CGATATGGAT CCATTTCTCA CGAACAATGT GTTCTCTCAT 
    CTCCACCATC GCAACCGGAT CCTTGTACGG ATTCTCAGGA TCGAATCCAT 
    CCGGCGCCGA CTCTTCGAAC TCCGGCAATC CCTTCTTCCT CCCCATCGGA 
    TTTTTGATTT CTTTTGTTCC CGTCTGATTT TCCGACAATC AGGTAATGTT 
    TTGTTGTTAT TTTGGGCTTT TA

AT1G49140.1

Model type
Protein coding
Short Description
Complex I subunit NDUFS6
Computational Description
Complex I subunit NDUFS6; CONTAINS InterPro DOMAIN/s: NADH-ubiquinone oxidoreductase, subunit 10 (InterPro:IPR019377), Complex I subunit NDUFS6 (InterPro:IPR020163); BEST Arabidopsis thaliana protein match is: Complex I subunit NDUFS6 (TAIR:AT3G18410.2); Has 165 Blast hits to 165 proteins in 75 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 92; Plants - 61; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G49150.1

Model type
Protein coding
Computational Description
unknown protein; Has 6 Blast hits to 6 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 6; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR