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ET13033

CSHL Arabidopsis genetrap mutant lines

Original: ET13033

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13033

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 7066520 [Map]; Strand: c
      • AT2G16310.1 - [+] show detail - pseudogene, RER1-related protein, blastp match of 58% identity and 2.2e-53 P...
        Distance: -330; Region: promoter
      • AT2G16320.1 - [+] show detail - transposable element gene
        Distance: -976; Region: promoter
    Flanking Genome Sequence: ET13033 - 3-prime edge 
    AAACGGTAGA GGTTTTTACC GACCGTTACC GACCGTTTTC ATCCCTACTT 
    CAAGCAACGA AACGAAATGT TAAGTAACGA AGAAATGGAA AGTGAGGATT 
    AGAGAAGAGG AAGAAACTGA CTTGCGTAAG AGTTAGGGTT TCTTTGAGCG 
    AGAAGGAGAT TTGAGATGAT GATCCTTGAA CGGAAGTGAG GAAGCGAAGC 
    AGATCTATCG GAAGAAGAAC CGACAAAGGA AGAAGAAGAC GAGAAGAGCG 
    ATTGATAAAT GGGTAAATTG CGCACAGTAG CCGTTGATTT AATTTCAGAT 
    TTTGACACTG TGGGTTGGAC CTTTCATCTT CTCTCGACTA CAGCCAAAAA 
    CTGATTAAAA TGCCCTTGAT GAAACTGAAC CCGGTTTGTA CGTACGGACC 
    GCGTCGTTGG AATCCAAGAG AACCGGGTTC GTACGTACAC TGTTCATCGA 
    CGAGAAATGC ATTAAATGAT TTCTGGGTTT CGGCGAATTT GACACTTGAG 
    ATTGGAATTA AAAAGTTTTA AAAATTGGTT GGGCTCAAAA GTTTTTAATG 
    CTAAAAAGTT TTGACAAGTC TAAAACTCAT GATTACCTAT TATAATAAAG 
    ATTATATTGT AAGATATTTA CATTATTGAG ATTAGAATTC TTGGAAAAAA 
    CGAAATTCGA AATTGTGTTA CGGTGAAGAA TCTGAAGTTT TCAGTTGCTG 
    TTTTACAAAG TTTGAAGGAT TGAAGGGGAG ACAATTTGTG TTCTG

AT2G16310.1

Model type
Pseudogene
Computational Description
pseudogene, RER1-related protein, blastp match of 58% identity and 2.2e-53 P-value to GP|10945247|dbj|BAB16908.1||AP002863 putative Rer1A protein (AtRer1A) {Oryza sativa (japonica cultivar-group)}
Link
InterPro Scan - TAIR

AT2G16320.1

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
pseudogene, hypothetical protein, similar to MURA transposase of maize Mutator transposon
Link
InterPro Scan - TAIR