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ET13041

CSHL Arabidopsis genetrap mutant lines

Original: ET13041

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13041

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 2632394 [Map]; Strand: w
      • AT3G08660.1 - [+] show detail - Phototropic-responsive NPH3 family protein
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: ET13041 - 5-prime edge 
    TCCTACTTTC TCCCTGAGGA TACTCACATT CTTTCTTGAG AGGATTGAAG 
    AGGAAGATGA AGAATGTGGT TACGATTCGG ATTCCACTGG ACAACACAGT 
    TCGTTGCTGA AAGTGGGACG GATCATGGAT GCTTACTTGG TTGAGATCGC 
    ACCGGATCCA TACCTGAGTC TACACAAGTT TACGGCTATT ATAGAGACAC 
    TACCCGAACA CTCACGTATC GTTGACGATG GGATCTACAG AGCCATTGAT 
    ATGTATCTCA AGGTAAACAA AAACACAATT GAACAAAGTC TTTTTATGTT 
    TTGAAAACAT CTGAAACTGA TAATCAAATA TGGAAATTAG GCTCATCCAT 
    TATTGACAGA AGAAGAACGC AAGAAGCTAT GCAACTTCAT TGACTGCAAG 
    AAACTTTCAC AAGAAGCAAG CAACCACGTG GCACAAAACG ATCGGCTGCC 
    TGTACAAATG GTGGTTAGAG TGCTTTACAC TGAACAGTTG CGACTGAAGA 
    AAGCTCTGTC GGGAGATTCA GAAGAAGGGT CGTGGGTT

AT3G08660.1

Model type
Protein coding
Short Description
Phototropic-responsive NPH3 family protein
Computational Description
Phototropic-responsive NPH3 family protein; FUNCTIONS IN: signal transducer activity; INVOLVED IN: response to light stimulus, N-terminal protein myristoylation; LOCATED IN: chloroplast; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: NPH3 (InterPro:IPR004249), BTB/POZ (InterPro:IPR013069), BTB/POZ fold (InterPro:IPR011333), BTB/POZ-like (InterPro:IPR000210); BEST Arabidopsis thaliana protein match is: Phototropic-responsive NPH3 family protein (TAIR:AT3G08570.1); Has 956 Blast hits to 919 proteins in 46 species: Archae - 0; Bacteria - 0; Metazoa - 68; Fungi - 0; Plants - 886; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Link
InterPro Scan - TAIR