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ET13042

CSHL Arabidopsis genetrap mutant lines

Original: ET13042

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13042

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1444809 [Map]; Strand: w
      • AT1G05030.1 - [+] show detail - Major facilitator superfamily protein
        Distance: -3392; Region: intergenic
      • AT1G05040.1 - [+] show detail - BEST Arabidopsis thaliana protein match is: Ubiquitin-associated (UBA) protei...
        Distance: 2560; Region: intergenic
    Flanking Genome Sequence: ET13042 - 3-prime edge 
    GAAACGGTAG AGGTATTTTA CCGACCGTTA CCGACCGTTT TCATCCCTAG 
    AACGAACGAA CTCACCGAAT AATTCTCAAA GCGAGAATGA GGAGAATGAG 
    ATTCATAACG GCTCTTCGAC ATAACTTGCT CAAGAAGAAA CTCAAGTTTT 
    TTAAAAGAAG AAGAAGAAAT AGCACTTTAG GGTTTTGCTC TTCGGAGGTT 
    GAGAACTTTG ATCCTTAAGA AGAGATTAGT ATAGTATTTA TAAGGAAGGT 
    TTTTTTTGGT AGGAAAGGGG GGAAAATCCC CCCATTTTAT TAAAGAAAAT 
    ACGAAATTAC ATTCGGATAG TTTTTGGACG CGCATGCCCA TTTATAAGGA 
    AGTTTATCAC CGACGAAAAG GAAATTTAAC TTTGATAAAG AATTTTAAAA 
    AGAAAATAAA AAGGAAATTC TGAGAACGCA AAAATAAAAG GGAAATCACT 
    CAGTATTTGA GCACGTGAGT GTCACGTGAT TACAAGTTT

AT1G05030.1

Model type
Protein coding
Short Description
Major facilitator superfamily protein
Computational Description
Major facilitator superfamily protein; FUNCTIONS IN: carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: mitochondrion, integral to membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), Sugar/inositol transporter (InterPro:IPR003663), General substrate transporter (InterPro:IPR005828), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: plastidic GLC translocator (TAIR:AT5G16150.3); Has 32095 Blast hits to 31550 proteins in 2260 species: Archae - 588; Bacteria - 15264; Metazoa - 5199; Fungi - 6752; Plants - 2455; Viruses - 0; Other Eukaryotes - 1837 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G05040.1

Model type
Protein coding
Computational Description
BEST Arabidopsis thaliana protein match is: Ubiquitin-associated (UBA) protein (TAIR:AT2G33010.1); Has 14 Blast hits to 12 proteins in 3 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 14; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR