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ET13048

CSHL Arabidopsis genetrap mutant lines

Original: ET13048

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13048

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26219966 [Map]; Strand: w
      • AT5G65609.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: -621; Region: promoter
      • AT5G65610.1 - [+] show detail - unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae ...
        Distance: 0; Region: intron2 (CDS)
    Flanking Genome Sequence: ET13048 - 3-prime edge 
    TTTTACCGAC CGTTACCGAC CGTTTTCATC CCTACGTGAA ACATTGCGGA 
    ACTTCGGACA CCACAAGACT TACAGATCAA TTAAGGACGG GATGCGTAGG 
    TGTGGTTAGT TTCCGAAGTT TTTAAATTTT AACACTTAAA CTAATTTTTA 
    AAAGTAATAG TAAAATTAAC ATGGTTTTAG TTAAAAAATT ATTAATTATT 
    TTCTTAATGT TTAGGTTTTT TTCTAATTAA AAATCATTAA TATTTTTTAA 
    AAATGAGTAA GTGTCAAATC TATATTACGT GAAAACATTG CCGAACTTCG 
    AACACCGCAA GACTTACGGA CCAATTAAGG ACGGGATGCT TAAGCGCAGT 
    TAGAATCCGA CGTTTTTAAA ATTTTAACAC TTAAACTCAT TTTTAAAAAG 
    TAATAATGAA ATTAATATGA TTTTATACTA AGTTTTATTT ATTGAAATAT 
    TTTAGTGAAA GATTTAAACT ATTTAATTAT AGTTTTACCA AAAACATTTT 
    TTAGAGAAAA GAAAAAGAAG AAAAAGAATG AATAAAGAAA TACCTGGTTG 
    GATTTGGTAG CAAAGAAGGG GCCCATAAAA AAAAGCCCAC CACCGTGAGC 
    CCACCTTGCG TCGTCGTCGT CTGAAATTCT CCGTCTTCTT CATTCGTAAT 
    CTGAGAAGCT TCTTTGTCTT TGATGATTGC TTTCTTCCTC CACATCGTCG

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26219983 [Map]; Strand: w
      • AT5G65609.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: -638; Region: promoter
      • AT5G65610.1 - [+] show detail - unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae ...
        Distance: 0; Region: intron2 (CDS)
    Flanking Genome Sequence: ET13048 - 3-prime edge 
    ATGAAACGGT AGAGGTATTT TACCGACCGT TACCGACCGT TTTCATCCCT 
    ACGTGAAACA TTGCGGAACT TCGGACACCA CAAGACTTAC AGATCAATTA 
    AGGACGGGAT GCGTAGGTGT GGTTAGTTTC CGAAGTTTTT AAATTTTAAC 
    ACTTAAACTA ATTTTTAAAA GTAATAGTAA AATTAACATG GTTTTAGTTA 
    AAAAATTATT AATTATTTTC TTAATGTTTA GGTTTTTTTC TAATTAAAAA 
    TCATTAATAT TTTTTAAAAA TGAGTAAGTG TCAAATCTAT ATTACGTGAA 
    AACATTGCCG AACTTCGAAC ACCGCAAGAC TTACGGACCA ATTAAGGACG 
    GGATGCTTAA GCGCAGTTAG AATCCGACGT TTTTAAAATT TTAACACTTA 
    AACTCATTTT TAAAAAGTAA TAATGAAATT AATATGATTT TATACTAAGT 
    TTTATTTATT GAAATATTTT AGTGAAAGAT TTAAACTATT TAATTATAGT 
    TTTACCAAAA ACATTTTTTA GAGAAAAGAA AAAGAAGAAA AAGAATGAAT 
    AAAGAAATAC CTGGTTGGAT TTGGTAGCAA AGAAGGGGCC CATAAAAAAA 
    AGCCCACCAC CGTGAGCCCA CCTTGCGTCG TCGTCGTCTG AAATTCTCCG 
    TCTTCTTCAT TCGTAATCTG AGAAGCTTCT TTGTCTTTGA TGATTGCTTT 
    CTTCCTCCAC CATCGTCG

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26219880 [Map]; Strand: w
      • AT5G65609.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: -535; Region: promoter
      • AT5G65610.1 - [+] show detail - unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae ...
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: ET13048 - 5-prime edge 
    TTCTGCTTGA AGCTCTCGTC GGTCGCTAGA GCTGAATTTG ATTTGAGGGA 
    GATGGAAAGA GACAAGGTTA ATGATTTTGT GGTTAATGGC AAGATTAACA 
    AGTTAATTAA GTTATTATCA AATAGAGGTT CGTAGCGATG GAGGAAGAGA 
    GACAGATAAG CTTTCGAGTA GACAAGATTC TGATGCATAA AGATGTACAA 
    CTTGTTCTTG GAAGATATGC TATGACAGTC TTTTAGTGAT GTCCTCATAT 
    TTCTTTGCCT TAATCCCTTT TTCTAAACCG TCAAAAGATT CATGGTTTGG 
    AAACTTGCAA TACCCTCTG

AT5G65609.1

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G67245.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G65610.1

Model type
Protein coding
Computational Description
unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR