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ET13051

CSHL Arabidopsis genetrap mutant lines

Original: ET13051

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13051

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 11541489 [Map]; Strand: c
      • AT5G31412.1 - [+] show detail - hAT transposon superfamily protein
        Distance: 0; Region: exon6 (CDS)
    Flanking Genome Sequence: ET13051 - 3-prime edge
    TTTTACCGAC CGTTACCGAC CGTTTTCATC CCTAACTGCC GGGTGCTCAC 
    GTCCACATTC ACCACCTGCT CATTATCTGA TTCAAATTCA ATATCTATAG
    TGATATCATG CTCTTCATGA GATTCAAGAT CTTCTCTAGG GTTCTCATTT
    GGAGTTTGGT AAACAGGCTC ACCATTAGGC TCT
  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 21393790 [Map]; Strand: c
      • AT3G57750.2 - [+] show detail - Protein kinase superfamily protein
        Distance: -189; Region: promoter
      • AT3G57750.1 - [+] show detail - Protein kinase superfamily protein
        Distance: -234; Region: promoter
    Flanking Genome Sequence: ET13051 - 3-prime edge
    GTAGAGGTAT TTTACCGACC GTTACCGACC GTTTTCATCC CTATGAAGAG 
    GGCTAACTGG TGGGCAGAGT AGCTACAGTT AACTTATTTG CTCAATGTGT
    AATATTTAAG AAGATGTGGA TCAAATTGAA ATATCTAATT ATGGGAGTAG
    AATGTATATT ATAAATGTAT TGGGTCAATA TTTAATAACT AAAACGACAT
    GGATAAGATT ATAATATCTA ATTTGTCGGA ATTTGACCAC TCAGTAGTTG
    ACTATCACAA ATCAAGTTTG CTTCTTTGCA AAAGCCAAAG TTTCGAACTT
    TCTCCAATAG AGATGAGCAA GAACAATAAG AAGAAGAGAA GATGGGATTT
    GAAGAACGGA GGGATTCTAT TAGAGGAGCT AATCGCTTCC TTCGACGGCA
    AAACCAATCC GATTCGTTGC TTCTCCTCCG ATCAGATCCT TAAAGCTACC
    GACAATTTCT CCGAAAGCCG AATTATCTCC AGCTGGGGAT ACTTCATATG
    GTACAAAGGC GTAATCGAAG AAAGACAAGT TTCAATCAAG AAATGGTCGA
    GTCAAAATCT CTCAAGCTTC ACAGAAGCGT ATAGAGATAT CTCTGTATCC
    TCTCAGATGA GTGGACACAA GAACGCTTTA AAGCTTATAG GTTGTTGTTT
    GGAGTTTGAT CTTCCAGCTT TAGTCTGTGA ATACACAGAA CACGGACCGC
    TTAATAGAGA CGGAGGACTC TCAAGTGGAG TGGTTTTACC ATGGAAAGTG
    AGATTGAAGA TTGCTAAAGA GATAGCTAGT TCTGTGACTT ATCTTCA

AT3G57750.1

Model type
Protein coding
Short Description
Protein kinase superfamily protein
Computational Description
Protein kinase superfamily protein; FUNCTIONS IN: protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G57710.1); Has 51261 Blast hits to 50836 proteins in 2124 species: Archae - 20; Bacteria - 5135; Metazoa - 13711; Fungi - 2551; Plants - 24631; Viruses - 129; Other Eukaryotes - 5084 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G57750.2

Model type
Protein coding
Short Description
Protein kinase superfamily protein
Computational Description
Protein kinase superfamily protein; FUNCTIONS IN: protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G57710.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G31412.1

Model type
Protein coding
Short Description
hAT transposon superfamily protein
Computational Description
hAT transposon superfamily protein; FUNCTIONS IN: protein dimerization activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Protein of unknown function DUF659 (InterPro:IPR007021); BEST Arabidopsis thaliana protein match is: hAT transposon superfamily protein (TAIR:AT1G43260.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR