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ET13054

CSHL Arabidopsis genetrap mutant lines

Original: ET13054

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13054

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 23106737 [Map]; Strand: w
      • AT3G62470.1 - [+] show detail - Pentatricopeptide repeat (PPR) superfamily protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: ET13054 - 3-prime edge 
    GTAGAGGTAT TTTACCGACC GTTATTATAA CAAGTTTGCA GCTGATTTCC 
    ACAGAGGGGG GCAACCGGAG ATATTTGAGG AATTGGCACA GAGAGCTAAG 
    TTCTCAGGTA AGTTTGCTGC AGCAGAGATC TTTGCGAGAT GGGCTCAGAT 
    GACTAGAAGG AGATTCAAAC AGAGGTTCAT GGAAGATTGA TGACTTGGGG 
    GCGGGTAACT GGATCGTTCA TCTCACTCGA

AT3G62470.1

Model type
Protein coding
Short Description
Pentatricopeptide repeat (PPR) superfamily protein
Computational Description
Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT3G62540.1); Has 39079 Blast hits to 12185 proteins in 290 species: Archae - 4; Bacteria - 32; Metazoa - 449; Fungi - 607; Plants - 36694; Viruses - 0; Other Eukaryotes - 1293 (source: NCBI BLink).
Link
InterPro Scan - TAIR