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ET13069

CSHL Arabidopsis genetrap mutant lines

Original: ET13069

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13069

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 15448658 [Map]; Strand: w
      • AT2G36830.1 - [+] show detail - gamma tonoplast intrinsic protein
        Distance: 2084; Region: intergenic
      • AT2G36835.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: 945; Region: intergenic
    Flanking Genome Sequence: ET13069 - 3-prime edge 
    TATTTTACCG ACCGTTACCG ACCGTTTTCA TCCCTACTGA GAAAGCTCTC 
    GGTCTTAGCC GTCGTTGCAA CGTCACCACT GATCTCTCCG CTTGTACCGG 
    TAACCAATTT CATCTCACTC GACCAAACGT TACTCTATGA GTGAGAATGG 
    TTAGTATCTT AAAATGTTAA TCATGTGTAT TCTTTACTAC AACTTAGTTT 
    CTACAAAATA CTCTCATATA ATGAATCATA GTTCAACAAA ATTCATAAGG 
    ATAATAAATC TATTTATCAT TTCCTAGAAG ACTAGAATAC TAAATAATGA 
    AAATAATTTA GAGAAGAAAA CCTAAAAATG ATGAAGATCT GTGAAAATTT 
    GGGACCCAAA CATTAATAAT TTATGCATAG GTCAGTCACT CAGCTATTTA 
    CTCTTTAGCA GATAGTGACC AACCAGCTGT CCTCTTTTAC GGTTCATTTT 
    TCAATCACTT TTGATAGTTT TTTGGCTTTG TCCCTCCTGC GAATCTGTAT 
    CCCATATTGT TTTGTTTTGA CATATTTAAC GATAATGAAT TTGTGAAATC 
    ACTTTTGCCC CTAACGTGGT TAATTA

AT2G36830.1

Model type
Protein coding
Short Description
gamma tonoplast intrinsic protein
Curator Summary
Encodes a tonoplast intrinsic protein, which functions as water channel. It has also been shown to be able to facilitate the transport of urea and hydrogen peroxide. Highly expressed in vascular tissues of the root, stem, cauline leaves and flowers but not in the apical meristems.
Computational Description
gamma tonoplast intrinsic protein (GAMMA-TIP); FUNCTIONS IN: water channel activity, urea transmembrane transporter activity; INVOLVED IN: in 6 processes; LOCATED IN: in 7 components; EXPRESSED IN: 33 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Major intrinsic protein, conserved site (InterPro:IPR022357), Aquaporin (InterPro:IPR012269), Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: tonoplast intrinsic protein 2 (TAIR:AT3G26520.1); Has 11016 Blast hits to 10983 proteins in 2213 species: Archae - 82; Bacteria - 5238; Metazoa - 1501; Fungi - 451; Plants - 2489; Viruses - 0; Other Eukaryotes - 1255 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G36835.1

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 26 Blast hits to 26 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 26; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR