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ET13074

CSHL Arabidopsis genetrap mutant lines

Original: ET13074

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13074

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 15329581 [Map]; Strand: c
      • AT5G38350.1 - [+] show detail - Disease resistance protein (NBS-LRR class) family
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: ET13074 - 3-prime edge 
    GGAGTTGAAG ATTATCTTGC TTTAAGTTTC TTGGACGTGA GGCAAGGGTT 
    TCACCTCTTA GCCGAGAAAT CTCTCATAAA TCTTAAGTTT TTATCTACTA 
    AGTATACACG TATAGAGATG CATAATCTAC TAGTGCAATT AGGTAGAGAC 
    ATTGTCCGTC ATAAGCCTGG GCACCAATCC ATTTGTGAGC CTGGGAAGCG 
    TCAATTTTTG GTTGATGCTA GAGATATTTG TGAAATACTC ATTGATAACA 
    CGGTAAGTTA TGTTATCAGT CTCTAGTTTC CTTG

AT5G38350.1

Model type
Protein coding
Short Description
Disease resistance protein (NBS-LRR class) family
Computational Description
Disease resistance protein (NBS-LRR class) family; FUNCTIONS IN: ATP binding; INVOLVED IN: apoptosis, defense response; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) family (TAIR:AT5G38340.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR