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ET13076

CSHL Arabidopsis genetrap mutant lines

Original: ET13076

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13076

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 2409542 [Map]; Strand: c
      • AT3G07550.1 - [+] show detail - RNI-like superfamily protein
        Distance: 0; Region: exon1 (5UTR)
      • AT3G07550.2 - [+] show detail - RNI-like superfamily protein
        Distance: -185; Region: promoter
    Flanking Genome Sequence: ET13076 - 3-prime edge
    CGGTAGAGGT ATTTTACCGA CCGTTACCGA CCGTTTTCAT CCCTATTTGG 
    ATTTTCAATC ATGGATTGAG CGATTGTTCT CTTTTTACTT GATTGATTTC
    TTCGATAAAC TCTGGATCTT TTGTGTGGGT TTTCATAATT TCTTTTTTTC
    CGATCAATCT AATCCAATCC AGAGATTCTG AGTCTCAAAG TTTTGCTTTT
    TTGAGTCTGT TTTCCAAAGA CATGTAGGGC TGGATTCTAA GCTTGCAACG
    TATCCATTTC CCTGGTCTTT CGTGGTGATC CGGAACTGAA GTGAAGGCTC
    TCTGGATTGC TTCATTTAGA TCAATATAGA GGTTTATCTG ACTTAGGTTC
    TTGATGAGTT TATGTTCTGT ATCAGAGTAG ATATATGTGG AGGAGATAGT
    TTTAGTTTTA AAGATTAGAT TTTGCTGTCC ATTTTATACA GGAATTGAAG
    TGAGGCATGG AAGATGTGTC CGAGTCTGAT AATAATGTTG
  • 5 prime edge [+] show sequence

    Not mapped

    Flanking Genome Sequence: ET13076 - 5-prime edge
    GAGAGCGCTG AAGCAGAAAT TTTGCTTGCT ATGAT
  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 2409464 [Map]; Strand: c
      • AT3G07550.1 - [+] show detail - RNI-like superfamily protein
        Distance: -13; Region: promoter
      • AT3G07550.2 - [+] show detail - RNI-like superfamily protein
        Distance: -263; Region: promoter
    Flanking Genome Sequence: ET13076 - 5-prime edge
    ATACCAAAAC AGAACGAGAG CGCTGAAGCA GAAATTTTGC TTGCTATGAT 
    TTTTTTTTCT TTTCGCATTT GTTTATTATT ATTTTTATTT GATTTCCTAA
    TCCTTCAAAT TATTCAATTT TGGAGATTTA TGCCGAAGGT GTGTCCCCGT
    CCCGACTTTT TAAAAAGGGG TGGGGATTGG GGATTGGGGA TTGGGGATTA
    CACATGAGGG TAATGTCAAC CCTAAATCAT ATAAGCACAT TTTCTTGAAT
    GAAAAAGATC TCTAGAGATG AATAAAAGAT CCCAATTTCT GAAGACAACT
    CATTTAAGTG ACCACCTTAA GAAGGGTCTT GAGCTACACA ACGTGGAAGA
    GATGCACAAG AAGGTAAATG CAGCATTCCG AGCTGATCGG CTCCAAACAA
    TGGATAACCA ATTTTGGGAC CCAACAGGAA ATTCGGAGGC GGCTGAAATA
    AACCACCAGG GGTGGCAACT CCGGGAAAAA CCAGGAAAAA AAAAAGCGGT
    GGGAGAAAAA AGGTCCTTGG AAAAAACATT TGGGCCGGGA AAGGGGAAAC
    CCACCGCCTT TTAGAAGAAG GTTGGTTTGG TCCC

AT3G07550.1

Model type
Protein coding
Short Description
RNI-like superfamily protein
Computational Description
RNI-like superfamily protein; BEST Arabidopsis thaliana protein match is: RNI-like superfamily protein (TAIR:AT5G23340.1); Has 6516 Blast hits to 2862 proteins in 227 species: Archae - 0; Bacteria - 210; Metazoa - 2727; Fungi - 707; Plants - 2248; Viruses - 0; Other Eukaryotes - 624 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G07550.2

Model type
Protein coding
Short Description
RNI-like superfamily protein
Computational Description
RNI-like superfamily protein; BEST Arabidopsis thaliana protein match is: RNI-like superfamily protein (TAIR:AT5G23340.1); Has 6516 Blast hits to 2862 proteins in 227 species: Archae - 0; Bacteria - 210; Metazoa - 2727; Fungi - 707; Plants - 2248; Viruses - 0; Other Eukaryotes - 624 (source: NCBI BLink).
Link
InterPro Scan - TAIR