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ET13078

CSHL Arabidopsis genetrap mutant lines

Original: ET13078

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13078

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 23015338 [Map]; Strand: c
      • AT5G56890.1 - [+] show detail - Protein kinase superfamily protein
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: ET13078 - 3-prime edge 
    GTAGAGGTAT TTTACCGACC GTTACCGACC GTTTTCATCC CTACTTTTTT 
    CATCTCTCTC GAAGATTATT AAAACAAAAA CAAAGTTGAG AATTTAGCAA 
    ACATAATGCA CAAAAAAGAA TGCAAATTTA CCAAATTGAT CCATATGGGT 
    CTAATCTAAT CCCAATTATT GAAAAAGTGA AAACAAATAA TTGTATAAAC 
    ATACCTGAGG AAGAAGCAGC AACTAAAACC GACGAAACAA GACAGATCCT 
    AAGGAGGAGA GTCAAATTCT CCATTCCATA GAAGAGATCA AGCTTCCTCG 
    ATGATCACGA GGAAGACAAA GAAGAATTAT TTGATGTGTA ATCTTAATCT 
    CCAAGTTTAA AGCAATCGAA GTGGCAGAAG AAGAAGAAAT GACTTCAACC 
    GCAAGAAGAA GAAGAAGCAA AGGAACAGTG AGAAATAAGC AAAGGAATGA 
    TTTTTTTTTT GTGAGACTTT AATGTCCACA ACCAAAAATA AGAAAATTAA 
    AGACGGAACC GAGTTTGGTG GAAAAAAACG GTAGTAATCA AAAGTAGTCT 
    CTATGGGCAA TAAATCTTTC ATCTTCATGT TGAAACAAAA ACGTTTTTTT 
    TTTTTTCCCC

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 23015260 [Map]; Strand: c
      • AT5G56890.1 - [+] show detail - Protein kinase superfamily protein
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: ET13078 - 5-prime edge 
    CCGGAACTTT ATTATTGCAA ACACAATGCG ATTTTACAAT GTGATTTTTT 
    TTTTTATGCT TTCGGGAAAA CAAAAATTTT GTTATAAAGG GTTTAAAACT 
    CAGGATCGGA ATTGTTATCT CCGTTATCAT CACCACCGTC TCCATTACCC 
    GAAACTTCAA AAGGGTTTGG TCAAGCCCCG AGTAATTCAC CTGAATCTCA 
    CAAATCCGAC AATGGGCCCC CGTCTAAAGT TTCTTCTCAC CCGACAATTC 
    CTCCTTTAGG GGATTGGGCA GCCCCCCCCC CGTCAAATTC CGTCGGAGGT 
    AAAGCACCGG CCGGGGGGCC GGTGGCCTTT GTTCCTAAGG CCCCGGGTAT 
    GTAACTTGGA TTGGATTGAA

AT5G56890.1

Model type
Protein coding
Short Description
Protein kinase superfamily protein
Computational Description
Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT2G20300.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR