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ET13081

CSHL Arabidopsis genetrap mutant lines

Original: ET13081

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13081

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 22710592 [Map]; Strand: c
      • AT1G61560.2 - [+] show detail - Seven transmembrane MLO family protein
        Distance: 0; Region: intron6 (CDS)
      • AT1G61560.3 - [+] show detail - Seven transmembrane MLO family protein
        Distance: 0; Region: intron6 (CDS)
      • AT1G61560.4 - [+] show detail - Seven transmembrane MLO family protein
        Distance: 0; Region: intron6 (CDS)
      • AT1G61560.1 - [+] show detail - Seven transmembrane MLO family protein
        Distance: 0; Region: intron6 (CDS)
    Flanking Genome Sequence: ET13081 - 3-prime edge
    TTTACCGACC GTTACCGACC GTTTTCATCC CTAGCCTTGA GAGATAAGTT 
    ATTATACAAC AGAAAAGTTA AAGATCAAAA GATTGACTTA TACCATGATG
    AAACCATGTC TCAGTGTTAA GTAATCAACT TTGGTTACAG ATCTAAAGAA
    CTGTCTGAAG AAACATACAA TCCACAGCGT AATAGTTGAT TTGCTCCAGA
    AACTCAGATG TCTACGCCCG AAAGATGTAT CCCGCGCAAA CCTAAACCTC
    TCGGGATCTA CATTATCCGA AACATTCCTT GTTGAAACTT CACACTCAAG
    TTTTACATTT AATCAATTTT TCATTCCAAG TTTGTAAATT ATACCGTGTG
    AATACTGATA TTCGATAGTC TTAGTCTCCT CTTCCCACTT CTCTCCACTC
    GACAAAANGN NANAANANAA ACAAAACAAA AAAGATCGTC TCTTCAGCGA
    AAAAAGGAAC ATCAAAACCG GTGTGATCAG AATGTGGATG GATATAAAAG
    AACTTACCTT GGTCTTTCCC AAAGCATAAG TAACAATGCA GTAGATCACA
    TGACAAACCG CAAGAACAAA GATGAATATA TGCAGCTGAT GCATACCATA
    AGCCGATACA AAAGCGACTT TTCCCTGGTA ACAAACAATA GTAAATGTCA
    CACTAGTGGC TCTTACAAAG AAAAGATTTC TATAGAATGA GAATTTACCT
    TCTC
  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 22710522 [Map]; Strand: c
      • AT1G61560.2 - [+] show detail - Seven transmembrane MLO family protein
        Distance: 0; Region: exon7 (CDS)
      • AT1G61560.3 - [+] show detail - Seven transmembrane MLO family protein
        Distance: 0; Region: exon7 (CDS)
      • AT1G61560.4 - [+] show detail - Seven transmembrane MLO family protein
        Distance: 0; Region: exon7 (CDS)
      • AT1G61560.1 - [+] show detail - Seven transmembrane MLO family protein
        Distance: 0; Region: exon7 (CDS)
    Flanking Genome Sequence: ET13081 - 5-prime edge
    CCTCTTTCTC CCTGCTCAGG CAAAGATCTT ACAGCATTGC ACGAATGCTT 
    CTTCTTTTTC TTCTGTTTCA GGCCCATTTG GCTCCTGGGA GCGACGCAAG
    ATTCGATTTC CGAAAGTATA TTCAGAGATC ACTAGAGGAA GACTTCAAAA
    CCATTGTCGA GATCAAGTAT GGAACTAATT ACGATTACAA ACTCCACTTC
    ACTAACCACT ACTTAATCTG ATGTTTTAAC TGCTTATATC TTCAGCCCTG
    TGATCTGGTT CATAGCTGTG CTATTCCTCC TGACAAACAC AAACGGTACA
    CTCGTTTTCA AAACGTCGCT GCATCGATAC CTCTTTAAAA GCCTTCAACA
    ATCCAAAACT AATAGATTAC TCTGCTTTTC TAATGAACAG GATTGAATTC
    TTACCTCTGG TTACCGTTCA TTCCCTTCA

AT1G61560.1

Model type
Protein coding
Short Description
Seven transmembrane MLO family protein
Curator Summary
A member of a large family of seven-transmembrane domain proteins specific to plants, homologs of the barley mildew resistance locus o (MLO) protein. The Arabidopsis genome contains 15 genes encoding MLO proteins, with localization in plasma membrane. Phylogenetic analysis revealed four clades of closely-related AtMLO genes. ATMLO6 belongs to the clade IV, with AtMLO2, AtMLO3 and AtMLO12. The gene is expressed during early seedling growth, in roots and lateral root primordia, in flower and fruit abscission zone, in vascular system of cotyledons, young leaves and petals, in mature rosette leaves, in anthers, as shown by GUS activity patterns. The expression of several phylogenetically closely-related AtMLO genes showed similar or overlapping tissue specificity and analogous responsiveness to external stimuli, suggesting functional redundancy, co-function, or antagonistic function(s).
Computational Description
MILDEW RESISTANCE LOCUS O 6 (MLO6); FUNCTIONS IN: calmodulin binding; INVOLVED IN: defense response to fungus, incompatible interaction, cell death, defense response; LOCATED IN: plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Mlo-related protein (InterPro:IPR004326); BEST Arabidopsis thaliana protein match is: Seven transmembrane MLO family protein (TAIR:AT1G11310.1); Has 556 Blast hits to 535 proteins in 58 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 551; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G61560.2

Model type
Protein coding
Short Description
Seven transmembrane MLO family protein
Curator Summary
A member of a large family of seven-transmembrane domain proteins specific to plants, homologs of the barley mildew resistance locus o (MLO) protein. The Arabidopsis genome contains 15 genes encoding MLO proteins, with localization in plasma membrane. Phylogenetic analysis revealed four clades of closely-related AtMLO genes. ATMLO6 belongs to the clade IV, with AtMLO2, AtMLO3 and AtMLO12. The gene is expressed during early seedling growth, in roots and lateral root primordia, in flower and fruit abscission zone, in vascular system of cotyledons, young leaves and petals, in mature rosette leaves, in anthers, as shown by GUS activity patterns. The expression of several phylogenetically closely-related AtMLO genes showed similar or overlapping tissue specificity and analogous responsiveness to external stimuli, suggesting functional redundancy, co-function, or antagonistic function(s).
Computational Description
MILDEW RESISTANCE LOCUS O 6 (MLO6); CONTAINS InterPro DOMAIN/s: Mlo-related protein (InterPro:IPR004326); BEST Arabidopsis thaliana protein match is: Seven transmembrane MLO family protein (TAIR:AT1G11310.1).
Link
InterPro Scan - TAIR

AT1G61560.3

Model type
Protein coding
Short Description
Seven transmembrane MLO family protein
Curator Summary
A member of a large family of seven-transmembrane domain proteins specific to plants, homologs of the barley mildew resistance locus o (MLO) protein. The Arabidopsis genome contains 15 genes encoding MLO proteins, with localization in plasma membrane. Phylogenetic analysis revealed four clades of closely-related AtMLO genes. ATMLO6 belongs to the clade IV, with AtMLO2, AtMLO3 and AtMLO12. The gene is expressed during early seedling growth, in roots and lateral root primordia, in flower and fruit abscission zone, in vascular system of cotyledons, young leaves and petals, in mature rosette leaves, in anthers, as shown by GUS activity patterns. The expression of several phylogenetically closely-related AtMLO genes showed similar or overlapping tissue specificity and analogous responsiveness to external stimuli, suggesting functional redundancy, co-function, or antagonistic function(s).
Computational Description
MILDEW RESISTANCE LOCUS O 6 (MLO6); CONTAINS InterPro DOMAIN/s: Mlo-related protein (InterPro:IPR004326); BEST Arabidopsis thaliana protein match is: Seven transmembrane MLO family protein (TAIR:AT1G11310.1).
Link
InterPro Scan - TAIR

AT1G61560.4

Model type
Protein coding
Short Description
Seven transmembrane MLO family protein
Curator Summary
A member of a large family of seven-transmembrane domain proteins specific to plants, homologs of the barley mildew resistance locus o (MLO) protein. The Arabidopsis genome contains 15 genes encoding MLO proteins, with localization in plasma membrane. Phylogenetic analysis revealed four clades of closely-related AtMLO genes. ATMLO6 belongs to the clade IV, with AtMLO2, AtMLO3 and AtMLO12. The gene is expressed during early seedling growth, in roots and lateral root primordia, in flower and fruit abscission zone, in vascular system of cotyledons, young leaves and petals, in mature rosette leaves, in anthers, as shown by GUS activity patterns. The expression of several phylogenetically closely-related AtMLO genes showed similar or overlapping tissue specificity and analogous responsiveness to external stimuli, suggesting functional redundancy, co-function, or antagonistic function(s).
Computational Description
MILDEW RESISTANCE LOCUS O 6 (MLO6); CONTAINS InterPro DOMAIN/s: Mlo-related protein (InterPro:IPR004326); BEST Arabidopsis thaliana protein match is: Seven transmembrane MLO family protein (TAIR:AT1G11310.1).
Link
InterPro Scan - TAIR