1. Home
  2. Mutant Lines
  3. ET13086

ET13086

CSHL Arabidopsis genetrap mutant lines

Original: ET13086

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13086

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 15670784 [Map]; Strand: c
      • AT3G43825.1 - [+] show detail - transposable element gene
        Distance: 0; Region: exon1 (NonCoding)
    Flanking Genome Sequence: ET13086 - 3-prime edge
    AACGGTAGAG GTATTTTACC GACCGTTACC GACCGTTTTC ATCCGTATTT 
    GTGGTGCTAC TAGCAAACCA ACAAAAGAAA GAGAAGAGGA GAAGATTCAC
    TTGTTTGTTT TGGGTCTCGA CGACTCTCGG TTTGGTGGTT TAAGCACAAT
    GCTTATCGCA ATGGATCTGT TTCCTACTCC TGGTGAAATA TACCCTTGCG
    TTATCAGGGA AGAACAACGC CTTGCTTCAG TCAGGATTCG TGAGCAGAGA
    CAAGAAGTGG TTGGCTTCGC AACACATGGC GATCAAAGTA GTTTGACATC
    TTTGCGACAA GAGATACAGC GTGGAGGACG ATCAGACTCC TCTATCATTA
    AGCCTCGGTC CATGATGTGT TCCAATTGTG GTCGTTCGGG TCACGAGAAA
    AAGGATTGTT GGCAAATTGT CGGTTTTCTC GAGTTGGATT GAACGTAATG
    GCGGGGTCGT GGTTCTAACA CCCGTGGCAG AGGAGGTCAC AGTTCTGGTC
    GTGGCTGAGG ACAACCGGTG ACAGCTCACG CAACGAGCTC TAATCCATCT
    ACCTTATTAG AATTTTCGCA AGACCAATTG CAAGTTCTCG CATAGATGAT
    CAAGGGACAA ATGGGCAATC CAAGTTATGA TAAACTGTCC GGTAAGACAA
    AATTTGGCAA TGTTATTCTC GATATTGGAG CATCTCATCA CATGACTGGG
    CAGCTCTCTC TTTTGACTAA CATTGTTCCT ATACCCCCCT ACTCGATGGG
    ATTTGCGGCC GGGAGCAAAC CTTTGCTTT
  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 22271623 [Map]; Strand: c
      • AT1G60450.1 - [+] show detail - galactinol synthase 7
        Distance: 0; Region: intron3 (CDS)
    Flanking Genome Sequence: ET13086 - 5-prime edge
    TCCTACTTTC TCCCTGCTGC TGAGCATATA AAATTGTTAG TTTTGGGGGA 
    AATTTAGTAT CTCTATTACT ATAAAATCTA TATAGATACG TCACTATTAA
    TTAATTTTAT TACCAAATAA AGCCTTCTTT AAACAGAAAT TAAAGTATTG
    TCCTATATGG GAATGCATTT ACATGAGGAT AGGTCTGCCA ATGCTTTCTC
    TTGCATTTTA ACATCTATTG ATTATTATTG GTGAAACTAA AATGAAAGGG
    ATCCAAGCCA TGGAGGTACA CAGGAGAAGA ACCTAACATG GACAGAGAAG
    ACGTCAAAAT GTTAATTAAG AAATGGTGGG ATATCTACAA TGACAAGTCT
    CTTGATTTTA AACCGAAAAG CCCTGCAGAT TTGGAAGCGA CCGTTTTGGA
    ATCAACAATT ATAGCCTTCG GTAACCGAAG CACCACTTTC CTACTCTCCT
    GCTGAATCTT CTTGC

AT1G60450.1

Model type
Protein coding
Short Description
galactinol synthase 7
Computational Description
galactinol synthase 7 (GolS7); CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: galactinol synthase 4 (TAIR:AT1G60470.1); Has 1127 Blast hits to 1126 proteins in 260 species: Archae - 0; Bacteria - 80; Metazoa - 260; Fungi - 247; Plants - 417; Viruses - 63; Other Eukaryotes - 60 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G43825.1

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
copia-like retrotransposon family, has a 8.3e-106 P-value blast match to GB:CAA72989 open reading frame 1 (Ty1_Copia-element) (Brassica oleracea)
Link
InterPro Scan - TAIR