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ET13098

CSHL Arabidopsis genetrap mutant lines

Original: ET13098

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13098

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 21511560 [Map]; Strand: w
      • AT3G58080.1 - [+] show detail - unknown protein; Has 3 Blast hits to 3 proteins in 2 species: Archae - 0; Bac...
        Distance: -998; Region: promoter
    Flanking Genome Sequence: ET13098 - 3-prime edge 
    GGATTTTACC GACCGTTACC GACCGTTTAG ATCCCTACTT CTACTATTAC 
    TAACAAAATT TAAAACCAAC AAGAGACGAA ATGATAAAGA CAAAAAATGA 
    AATTGACAAG AGGTCGGGAG ACATGTATGA CATCATAATA TCTAGACATG 
    TAACATCGTT AATGCAATAT CTGAAAAGAT TCTCTCTCCA TTTATAATAA 
    TTAAATGAAT CGTGGTCCAT ACAAAATGCT TTAAAAAAAT GAAACTCATC 
    TAGCTTTTCA GACAATAAAA ATATCTTCAA CCCACTAAAA TGATTGAAGA 
    ATGATTTTGT TCAAGTGAAG ACTAATATTT ATAAGCAACA TTTTCTAAAA 
    TTCTACAACA TTGTGATAAA AGTGTACGTT ATATTAGGGT CTAAGTCTAG 
    CTTTCGAAAA TGGTCTCTTC ATAAGACATG TGTATCGACA TTGATTGTGT 
    ATAACTGTAT ATAGAGGTGT AATCTAGAGT GTTTAAGTTT AACTATGAAA 
    AGACAATGGT GGGCTCGTGT TCTTAACTTC ACTTCATTTG TTGTATAGTT 
    TTTTATTTTA TTTTTTTGCT GTTTTTAATC TGCTAAAAAT CATTTAGCAC 
    CATAAAGTTT TGCTTGTGAG GTTGGTTATA TGAGGGACAA GATATGTTTG 
    CCCATTAAAA TCTTCTTCAC TTCATCG

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 21511651 [Map]; Strand: w
      • AT3G58080.1 - [+] show detail - unknown protein; Has 3 Blast hits to 3 proteins in 2 species: Archae - 0; Bac...
        Distance: -1089; Region: intergenic
      • AT3G58090.1 - [+] show detail - Disease resistance-responsive (dirigent-like protein) family protein
        Distance: 668; Region: intergenic
    Flanking Genome Sequence: ET13098 - 5-prime edge 
    GAGCTAGAGT ACTAGACATA GAATACGGTT AACTCCAGTT TTTTTGAAAA 
    CGTAAACGTA AAAAATTTAT TTTAAAACTG GTTCGATATA CTGGTCCAAG 
    ATATCCGACC ATAACCCAAA TTTTGTCTTT TATGATTTAG AAATGTTAAT 
    AAACAATAAT AAAGGAAATT ATTTTTAAAA ATTTGAAAAA TTGCTATGAA 
    TTGTTTTTTT GAATAATTCA ATTTGTACAA TTCTGTTATC AGCCACATCA 
    CCGACCGAGT AAAAGCAACA ATCCGTGGCT TGTTTTTGCT TCAGAAGCGT 
    TGCCCAAGAC ATGCAGCGAT TCCTTAGATT TT

AT3G58080.1

Model type
Protein coding
Computational Description
unknown protein; Has 3 Blast hits to 3 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G58090.1

Model type
Protein coding
Short Description
Disease resistance-responsive (dirigent-like protein) family protein
Computational Description
Disease resistance-responsive (dirigent-like protein) family protein; CONTAINS InterPro DOMAIN/s: Plant disease resistance response protein (InterPro:IPR004265); BEST Arabidopsis thaliana protein match is: Disease resistance-responsive (dirigent-like protein) family protein (TAIR:AT1G65870.1); Has 879 Blast hits to 874 proteins in 45 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 871; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink).
Link
InterPro Scan - TAIR