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ET13107

CSHL Arabidopsis genetrap mutant lines

Original: ET13107

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13107

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 14402618 [Map]; Strand: w
      • AT4G29210.2 - [+] show detail - gamma-glutamyl transpeptidase 4
        Distance: 0; Region: exon3 (CDS)
      • AT4G29210.1 - [+] show detail - gamma-glutamyl transpeptidase 4
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: ET13107 - 3-prime edge 
    CGGTAGAGGT ATTTTACCGA CCGTTACCGA CCGTTTTCAT CCCTAATGTC 
    GGGAGTGATT TCCGTGGGTG TTGAGAAATC ATCCATCTCG TTGTTAAGTA 
    CAATTCCAGT TGAAGGTGAT AACACCCCGG CACCAAAACG GTAATTCACG 
    GTTGAGGTCA TCGACACACT GTTGCGATCC GCATCCACAA CGCAGAAATG 
    ACTCGTTCCT TGGTCCCTGA GTTGGCTCCA CCGGTTCATA TCACTCGACC 
    ATGGGAATGT CGTGTTGTCG AAAATCCTCT TTTGGATTTC TTCCGCGTGA 
    GCCTTCGAGA GCATTTGGTT CATAGAGTTT GTTACATTAA CGAACTCAGG 
    GTCTCCAAGA TCCATACGAG CTGCAAACAT ATGTTTCATT GCTTCTATCA 
    AACGGTGCAG CCCGAGCTCT CTTCCCGAAG CAGTGTAAAG ATTCGAGTAA 
    CTATCCAAGA TATTCATAAC CATCGAAAAA CCGACTGTAC CGCCCGAAGG 
    AGGCGGCATT CCATGAACCG TATAACCCAT AACATCCACA GACATTGCAT 
    CGGGAACTCG GACCTTATAA CTTCTTAGAT CATCCATCGT TATGATCCCT 
    CCCGCCTTCT TCACATCTTT A

AT4G29210.1

Model type
Protein coding
Short Description
gamma-glutamyl transpeptidase 4
Curator Summary
The gene encodes a gamma-glutamyltransferase (AKA gamma-glutamyl transpeptidase, EC 2.3.2.2) that is located in the vacuole and is most active in roots. The encoded enzyme is involved in the initial degradation of glutathione conjugates in this cell compartment. It is also induced by xenobiotics and contributes to xenobiotics metabolism. Note that conflicting nomenclature exists in the literature: At4g29210 is named as GGT3 in Plant J. 2007 Mar 49(5):878-88; At4g29210 is named as GGT4 and At1g69820 as GGT3 in Plant Physiol. 2007 Aug 144(4):1715-32.
Computational Description
gamma-glutamyl transpeptidase 4 (GGT4); CONTAINS InterPro DOMAIN/s: Gamma-glutamyltranspeptidase (InterPro:IPR000101); BEST Arabidopsis thaliana protein match is: gamma-glutamyl transpeptidase 1 (TAIR:AT4G39640.2); Has 9173 Blast hits to 9142 proteins in 1473 species: Archae - 86; Bacteria - 4214; Metazoa - 707; Fungi - 305; Plants - 112; Viruses - 1; Other Eukaryotes - 3748 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G29210.2

Model type
Protein coding
Short Description
gamma-glutamyl transpeptidase 4
Curator Summary
The gene encodes a gamma-glutamyltransferase (AKA gamma-glutamyl transpeptidase, EC 2.3.2.2) that is located in the vacuole and is most active in roots. The encoded enzyme is involved in the initial degradation of glutathione conjugates in this cell compartment. It is also induced by xenobiotics and contributes to xenobiotics metabolism. Note that conflicting nomenclature exists in the literature: At4g29210 is named as GGT3 in Plant J. 2007 Mar 49(5):878-88; At4g29210 is named as GGT4 and At1g69820 as GGT3 in Plant Physiol. 2007 Aug 144(4):1715-32.
Computational Description
gamma-glutamyl transpeptidase 4 (GGT4); CONTAINS InterPro DOMAIN/s: Gamma-glutamyltranspeptidase (InterPro:IPR000101); BEST Arabidopsis thaliana protein match is: gamma-glutamyl transpeptidase 1 (TAIR:AT4G39640.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR