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ET13124

CSHL Arabidopsis genetrap mutant lines

Original: ET13124

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13124

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 12598449 [Map]; Strand: w
      • AT2G29340.1 - [+] show detail - NAD-dependent epimerase/dehydratase family protein
        Distance: 0; Region: intron5 (CDS)
    Flanking Genome Sequence: ET13124 - 5-prime edge 
    ATGAGTATAT GAATAAAAAA ATAAATATAT CATAATTACA TTATGGATAT 
    ACTTACAATG TATCTCTCAT ACATGAAAAT GTTCTATTCC ATCTTGTGTT 
    TACTACTAAC TTACTAAGTG AAAAGAAGAC TCTGTTTTTA TGCTCTGTTT 
    TGTTGTAAAC CGGTAGACTT AGAAAAGTTG GGACCTCATA GTTGAACCCA 
    AAATAACAAA AGTGAATTTC AAAACTAGCA TATATATAAT AGAGACTCAA 
    AATAAAGCAA TCACAGAGAG ATAAACCGAA AATTCAATGG ATGGCAACGA 
    GAAAACCTTT TGTGACCAAC TACATGATAC ATTGATATAC CATTTTATGA 
    CATACTATTA ATTAATAAAT GCTGTGGTGT GCCCATACCG GATTCATATA 
    AATGTTTATA CGACTGCATA GCATTTCCAC TACAGTTTAA ACTCTACCAC 
    CCAAATACCA ATTTTTTTTT TTTTAAAAAT TGTTTTCAAA GGGGTTTTTT 
    TAAAAAAAAC TCC

AT2G29340.1

Model type
Protein coding
Short Description
NAD-dependent epimerase/dehydratase family protein
Computational Description
NAD-dependent epimerase/dehydratase family protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G29320.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR