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ET13128

CSHL Arabidopsis genetrap mutant lines

Original: ET13128

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13128

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 8946585 [Map]; Strand: w
      • AT5G25630.2 - [+] show detail - Tetratricopeptide repeat (TPR)-like superfamily protein
        Distance: -638; Region: promoter
      • AT5G25630.1 - [+] show detail - Tetratricopeptide repeat (TPR)-like superfamily protein
        Distance: -786; Region: promoter
    Flanking Genome Sequence: ET13128 - 3-prime edge 
    TTTACCGACC GTTACCGACC GTTTTCATCC CTACTAGTAA CACATAAGAT 
    ATATGAGCCA TTGCACTACT TGTTAACTGA TTTTGATAAG CAAAATTATT 
    AATATTGACA TGGTTACGAT TCTAAACCCG ATTTAGTAAT GTTATTGATT 
    CTATAGTGGA ATTTGGTTAG ATATGGGTTA TACAATAACC TTCTTATTTA 
    GAAGATGATG TGTTGAATTC ATTATATATT TAACATGTAT TCTCCTTTTT 
    GTTTAACATT TTATTCAATC AATTTCTTCA AATGAGGACT AATTGTTACC 
    AACGTTTTCG AATTCAACAT ATTAGAAAAG GTTTCCAAAT GGAGGATAAG 
    TGTGATCTAG TAGTCACCCA CTTAACAATA CATAATTGGT CGACTAAAAC 
    AAAAATAAAA ACGATAGACA CAATACATAA TCTCTTAGCT CTAATTTGGC 
    AAGAGTAGAT TGGTCGGAGC TTAAAACCCA AACCTCACCT TCCAACTACC 
    CAACGATATG AATATTTTGT AAATTGCAGA AAGACCAAAA ATGTAACCAT 
    CATCCATTCA TTTTTATTTC TTTTTGTTTC CAATGTATTA ATTATACCCA 
    TTGACATCAC ACTACATTAT ATTTTATTTT CCATTTGACA AGGCGCTGAC 
    TATTACGTGG ATATATGTAG CCGTACATGC GGGACGAAGG ATTATTG

AT5G25630.1

Model type
Protein coding
Short Description
Tetratricopeptide repeat (TPR)-like superfamily protein
Computational Description
Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: protein kinase family protein (TAIR:AT5G21222.1); Has 43023 Blast hits to 13141 proteins in 298 species: Archae - 3; Bacteria - 54; Metazoa - 633; Fungi - 665; Plants - 40141; Viruses - 0; Other Eukaryotes - 1527 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G25630.2

Model type
Protein coding
Short Description
Tetratricopeptide repeat (TPR)-like superfamily protein
Computational Description
Tetratricopeptide repeat (TPR)-like superfamily protein; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: protein kinase family protein (TAIR:AT5G21222.1).
Link
InterPro Scan - TAIR