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ET13131

CSHL Arabidopsis genetrap mutant lines

Original: ET13131

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13131

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 6848061 [Map]; Strand: w
      • AT3G19710.1 - [+] show detail - branched-chain aminotransferase4
        Distance: 0; Region: exon5 (CDS)
    Flanking Genome Sequence: ET13131 - 3-prime edge 
    TTTTACCGAC CGTTACCGAC CGTTTTCATC CCTAGTGTGA AGAGCATCAC 
    AAACTATTGT CCTGTAAGTT TTAAAAATAT ACATCAAATT TTCATAATTA 
    CATGACTAAA TGATTGTAAT GGAAAAATTT CTCGTTGAAG GTTTGGATAC 
    CATTGGCAGA GGCGAAAAAA CAAGGTTTCT CTGATATTTT GTTTTTGGAT 
    GCTGCAACTG GCAAAAACAT TGAAGAACTT TTCGCAGCTA ATGTTTTTAT 
    GCTCAAGGTA AAAAATAAAT ATACAAATTT ATTGAAAATG CATGTTGAGG 
    TTTATACATG TGTTATAGAA TATTAAGATG GTTGTGATGA TATTTTTGTA 
    TATAGGGCAA TGTTGTATCG ACACCAACAA TTGCAGGAAC TATTTTGCCC 
    GGAGTCACTC GAAACTGCGT AATGGAATTG TGTCGTGATT TCGGCTACCA 
    GGTTGGAATA TTTCATTATC ATACATATAT CAAGTTGATC TTGTAATTTG 
    CGAAAAAAAT CTCCTTACTA ATAATATTCA TCATGCATGT ATAATAATTT 
    CCTTTTGGTC TTTCACGTTG TAAAAAGGTC GAGGAACGTA CGATTCCTCT 
    AGTGGACTTT CTCGATGCGG ACGAAGCTTT CTGTACTGGC ACTGCTTCCA 
    TTGTGACTAG TATTGCATCC GTAACCTTTA AAGACAAAAA GTAATACTTT 
    CTTCCCT

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 6848167 [Map]; Strand: w
      • AT3G19710.1 - [+] show detail - branched-chain aminotransferase4
        Distance: 0; Region: intron4 (CDS)
    Flanking Genome Sequence: ET13131 - 5-prime edge 
    AAAAGCTCGA CGAAACTGAT CTTCGATTTT CAGATTCAAA CCAGAGTTAT 
    CCTATTCCAA ACAAAAATCC GAAAATAATC AAATTTAACA TAATGGTTTT 
    CGTTAAACAA CATAACCCTT TAATTTAAAA CCAACTCTCA ACAAGTAATT 
    GATGCATGCA TGTTATATTA CGTACTTGGA ATCCCTTATA TTTTCATATG 
    TGAACAATAA AAGAAAAACG ACAAGAACAC TAGTCACCTT ATGATAACGT 
    CCAACAGGAC AGGCAAAAGC TGTGAAGGTG GTCTCAGGAA TGGGAAATGA 
    ACCAAGAATC GGACCCACTC CCAAACAAGA TAGGCCTAAT ATA

AT3G19710.1

Model type
Protein coding
Short Description
branched-chain aminotransferase4
Curator Summary
Belongs to the branched-chain amino acid aminotransferase gene family. Encodes a methionine-oxo-acid transaminase. Involved in the methionine chain elongation pathway that leads to the ultimate biosynthesis of methionine-derived glucosinolates.
Computational Description
branched-chain aminotransferase4 (BCAT4); CONTAINS InterPro DOMAIN/s: Aminotransferase, class IV (InterPro:IPR001544), Branched-chain amino acid aminotransferase II (InterPro:IPR005786); BEST Arabidopsis thaliana protein match is: D-aminoacid aminotransferase-like PLP-dependent enzymes superfamily protein (TAIR:AT1G50110.1); Has 11097 Blast hits to 11097 proteins in 2502 species: Archae - 154; Bacteria - 6834; Metazoa - 263; Fungi - 399; Plants - 250; Viruses - 0; Other Eukaryotes - 3197 (source: NCBI BLink).
Link
InterPro Scan - TAIR