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Mutant Lines
ET13132

ET13132

CSHL Arabidopsis genetrap mutant lines

Original: ET13132

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13132

Determination of insertion point(s)

3 prime edge [+] show sequence

Chromosome: 1; Position: 9544156 [Map]; Strand: w
- AT1G27470.1 - [+] show detail - transducin family protein / WD-40 repeat family protein
  Distance: 0; Region: exon1 (CDS)
- AT1G27480.1 - [+] show detail - alpha/beta-Hydrolases superfamily protein
  Distance: -358; Region: promoter

TTACCGACCG TTACCGACCG TTTTCATCCC TACCGGTGGT AGCTCCGGCC 
ACCAGCGCCG ACGGTTCTCA GGTCGCCGCA GCTCGTGAGG ATGGTTCTCT 
TGAGCTCTGG CTCGTCTCTC CCGGTGCTTC CTCTTGGCAC TGTCAGCTCG 
TACGTGCTTT TGTTTTCTCT CTTCCAATTT TGAACATTTT GAGTCGGTTA 
TATTCGTGGT AACTGATTTG AGTTTTATTG TTCACTTTCT TTTGAGTATA 
GATCATTCAT GGAGATCCAA AATCGAGAAT CTCGCACCTT GCGTGGTTTG 
GTACTGGTTC TAAAGGTTCT TCTCTCCCGC TAGATTGTTT TCTTCGAGCA 
TTGATGGCTC AATTTCAGAG CGGGATCTTT TCGACTTGAA GCAGAAGGCG 
AATTCCATCG AACAAAAGTT TTTAGCTTCT TGTAAATGAT TCCAGCTACT 
TCCAAAATAA GTTCATTCGC TAATTTGCTC GTATGGTATC TAATTGTTCA 
GGTCGTCCTA GATTCAATTG GGTTTTCAAT CTGGCAAATA GCTCTGGCCC 
CTATCTCTAT TGAAGCAGAA AGCAAAGAAG CCAAGCCGAT TCAGAACGGA 
TACTCGAGCG AGAAATCAGA CGACGAGGAA GAAAGCGGAG CCGAAGATGA 
TTCAGAGTTG GACGAGCCCG ATGAGAAAGC GGAGGCCTTG GATAGGC

5 prime edge [+] show sequence

Chromosome: 1; Position: 9544254 [Map]; Strand: w
- AT1G27470.1 - [+] show detail - transducin family protein / WD-40 repeat family protein
  Distance: 0; Region: exon1 (5UTR)
- AT1G27480.1 - [+] show detail - alpha/beta-Hydrolases superfamily protein
  Distance: -260; Region: promoter

CTTCCAATCG ATGGAGCTGC ACCGGTACTC AAACATGGTG GCGACGGAGA 
AAGAGAAAGA GATGAGAGAC GACGAAGCAA ATTGCGTTTT TAGGTTTTTC 
AAAGGGTTTT GACTTTTTTT TAGTTAGGAG CGCAGTTTAA AATCGGTCGG 
GTCGACCCGA CCCATTGGGC CATAAATCTG GTTTCAAGTT AAATACGTTG 
TATAATGCCA CGTAGGCAAA TACAAAATAA GAAGGAAATA CAAAATAAAT 
ATTTGTAGAG CCTCTAGATG ATTACGCGGG TTCCATATCC ACCATATACT 
ACTTATCTTA AGCCTTACGT TTTAAGATAC TACTCTGTTT TTCAAATTCA 
ATGGACCTTT TTCTTCAAAT CTCCAGCTTT CTGCATAGAT CCATGACCAT 
GAGAGTCTGT TTCTTAGAAC GAAAACGAAA AAAATATC

AT1G27470.1

Model type: Protein coding
Short Description: transducin family protein / WD-40 repeat family protein
Computational Description: transducin family protein / WD-40 repeat family protein; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat 2 (InterPro:IPR019782), Cytochrome cd1-nitrite reductase-like, C-terminal haem d1 (InterPro:IPR011048), WD40-repeat-containing domain (InterPro:IPR017986), WD40 repeat (InterPro:IPR001680), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin family protein / WD-40 repeat family protein (TAIR:AT4G07410.1); Has 9350 Blast hits to 6259 proteins in 471 species: Archae - 14; Bacteria - 2955; Metazoa - 2262; Fungi - 2287; Plants - 792; Viruses - 0; Other Eukaryotes - 1040 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G27480.1

Model type: Protein coding
Short Description: alpha/beta-Hydrolases superfamily protein
Computational Description: alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: phosphatidylcholine-sterol O-acyltransferase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lecithin:cholesterol acyltransferase (InterPro:IPR003386); Has 1076 Blast hits to 1070 proteins in 248 species: Archae - 0; Bacteria - 41; Metazoa - 667; Fungi - 0; Plants - 226; Viruses - 0; Other Eukaryotes - 142 (source: NCBI BLink).
Link: InterPro Scan - TAIR