1. Home
  2. Mutant Lines
  3. ET13141

ET13141

CSHL Arabidopsis genetrap mutant lines

Original: ET13141

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13141

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 26371956 [Map]; Strand: c
      • AT1G70010.1 - [+] show detail - transposable element gene
        Distance: 499; Region: intergenic
      • AT1G70020.1 - [+] show detail - Protein of unknown function (DUF1163)
        Distance: -5414; Region: intergenic
    Flanking Genome Sequence: ET13141 - 3-prime edge 
    AATGAAACGG TAGAGGTTTT TACCGACCGT TACCGACCGT TTTCATCCCA 
    CGAACTAACA GCTTTTGAAG CTTTCGTTGA TTGTCCTCTA GATCGGATAA 
    AGAGTTCAAA TCTTTAACAA TTTTGATATA AGATGAACAT GGAGACAAAC 
    TACGACTATA TTCCGTAGAT CTCCTTTTAT ATTATCTTTC TTTTTATTTA 
    GTTGACATCA TTTTTTAAAA ATCGATTTTT AGAGCCAAAA TAATCGTTGA 
    CTGTGAAGCT ATCGAACAAT ATATGTAAAT CTATCCCACT AATACATCAC 
    TAGACAAAAT TTCCAGCAGC GTAATCGAAA ACCAAATGTC CATATACGAA 
    TGATTGATTC TTAAAAATGC AAAAATTTAT GGTCAGACCC AAAGTTGTAA 
    TCTGAGTGTA TTAGAATTAA ATAAGAAGAA AACAAATGGA TTGACAAAAG 
    AGTGGTGGAG GGAACAAAGA GTGAATGGAC GGTGAAGGAG GCATATTCGG 
    TCGCTTCCTT TTTTTTGTTG AAAAAGATTT AGTTGTCACT TA

AT1G70010.1

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
copia-like retrotransposon family, has a 3.2e-289 P-value blast match to GB:CAA72989 open reading frame 1 (Ty1_Copia-element) (Brassica oleracea)
Link
InterPro Scan - TAIR

AT1G70020.1

Model type
Protein coding
Short Description
Protein of unknown function (DUF1163)
Computational Description
Protein of unknown function (DUF1163); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1163 (InterPro:IPR009544); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1163) (TAIR:AT5G39330.1); Has 42 Blast hits to 42 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR