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ET13142

CSHL Arabidopsis genetrap mutant lines

Original: ET13142

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13142

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 25673920 [Map]; Strand: c
      • AT1G68460.1 - [+] show detail - isopentenyltransferase 1
        Distance: -3738; Region: intergenic
      • AT1G68470.1 - [+] show detail - Exostosin family protein
        Distance: 2475; Region: intergenic
    Flanking Genome Sequence: ET13142 - 5-prime edge 
    CTACTTTATC CCTGAGTAGT AGAATGCGAA CTACGAAAGT CTGAATCACT 
    ATAAGCCTTT CACTAGATGT CTAGAAAGAT AATTTTGGTC CCAAAAAAAA 
    TATAGTTTTA TAAAAGACTA AACTAAACAA AATTTAAAAA ACTCCAATTT 
    ATATGTAAAG AATTTTAACT TAATATTTGT ACAAAACTAA AGAATTTTTC 
    AAATATATTT GAGGTTTTTT TTTGGTAAAA CAAAACAAAA TTTTTGGTTT 
    TTTGGGCTAA GGGGGAATTT TCAATCCCCT TTCCAAAGTC AAAACAAATT 
    TTAACCTTTG GTAAACCGAA AAGGCCTTTT TCCATCCTTG GACAAGAACT 
    TTTTTAAACA AGTGGACCCA CTTAAGCCAA GTTTTAATTT TCCAACTTAA 
    AAGGGACCGA AGGTCCAAGC CGTGAACTAG AAAACCAATA AAAACCCTTA 
    GCGAAAAAAA AAGCACCTTT TTTTCCCCCC CTTTGGATTG GAAAAAAAAG 
    GCCGGCTTTA AAAAAACCGG TT

AT1G68460.1

Model type
Protein coding
Short Description
isopentenyltransferase 1
Curator Summary
Encodes a putative adenylate isopentenyltransferase. It catalyzes the formation of isopentenyladenosine 5'-monophosphate (iPMP) from AMP and dimethylallylpyrophosphate (DMAPP), but it has a lower Km for ADP and likely works using ADP or ATP in plants. It is involved in cytokinin biosynthesis.
Computational Description
isopentenyltransferase 1 (IPT1); FUNCTIONS IN: AMP dimethylallyltransferase activity, ATP/ADP dimethylallyltransferase activity; INVOLVED IN: cytokinin biosynthetic process, secondary growth; LOCATED IN: chloroplast; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: tRNA isopentenyltransferase (InterPro:IPR002627); BEST Arabidopsis thaliana protein match is: ATP/ADP isopentenyltransferases (TAIR:AT3G19160.1); Has 7944 Blast hits to 7761 proteins in 2606 species: Archae - 0; Bacteria - 5388; Metazoa - 167; Fungi - 152; Plants - 293; Viruses - 0; Other Eukaryotes - 1944 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G68470.1

Model type
Protein coding
Short Description
Exostosin family protein
Computational Description
Exostosin family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: Exostosin family protein (TAIR:AT2G20370.1); Has 782 Blast hits to 782 proteins in 34 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 0; Plants - 758; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink).
Link
InterPro Scan - TAIR