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ET13147

CSHL Arabidopsis genetrap mutant lines

Original: ET13147

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13147

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 7225771 [Map]; Strand: c
      • AT2G16670.1 - [+] show detail - transposable element gene
        Distance: 0; Region: exon1 (NonCoding)
    Flanking Genome Sequence: ET13147 - 5-prime edge 
    CTACTTTCTC CCTGGCAAAG GATTTGGAGA TTGATGCTCC AGAACAAAAT 
    CATAGCTGGA CCATTGAGGA TCTACCTCCC GGGAAACAAA CGAGTGGTAG 
    TCAATGGGGC TATAAGGTGA AACACGATTC TGATGGCTCG GTTGAACGGT 
    ATAAGGCGCG GACTGGCTGC GCTGGGGAAC AAACAAAAAG AGAGGTGACG 
    ACTATGGGGA AACTTTCGCT CTTGTCGCAA AAATGGCTAC TGTGCGCTTA 
    TCTCTTGATG AACCAGTAAA ACGCAATTGG GAAATCCACC AAATGGATGT 
    TCACAACGCG TTTTACATGG AGATTTGCGT GAAGAAGCAT ATATGAAGCT 
    ACCTCCTGGA TTTGAAGCTT CACATCCCAA CAAGGTTTGT CGTCTCCCTA 
    AAGCCCTATA CGGATTAAAA CAGGCTCCT

AT2G16670.1

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
copia-like retrotransposon family, has a 1.2e-190 P-value blast match to GB:AAB82754 retrofit (TY1_Copia-element) (Oryza longistaminata)
Link
InterPro Scan - TAIR