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ET13161

CSHL Arabidopsis genetrap mutant lines

Original: ET13161

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13161

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 19906155 [Map]; Strand: w
      • AT1G53350.1 - [+] show detail - Disease resistance protein (CC-NBS-LRR class) family
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: ET13161 - 3-prime edge 
    AACGGTAGAG GATTTTACCG ACCGTTACCG ACCGTTTTCA TCCATTGAAC 
    GAGGTAAGCG AAGGTACCTC AGTTCTTGCA TCTCTTTCAA AACATTTGGC 
    ACATGAACTA GTAACCGATC AGCAACACCT AAGTTCAAAC AGAGCAGAAG 
    CTTTAGATTC CCCAGAGAAG AAGGTAGATG AGATACTCCA GCCTCGTATA 
    AGCTCAAGAA TCTCAAGTGA ATGAGATCTC CAATGCTGGA TGGTAACTTC 
    CCTCCTTCAA ACTGTACGTA AGAAAGATCT AACACTCTAA GCAAAGGCAA 
    ACATTGGAAA CCTCGAGGCT TCCAAAACTT TTCCTCGACT CCAAATATCA 
    ATACAGATCT GGCTTTTTTA TTATCTTTGT GTCCCAGCAT ATGAAGTGCA 
    TTACCACTAT GTAGAACAAG TCTGCGAGAT CTACAAGGAG ATTGTGCATT 
    GATGGTAGTA CTTGTAGTTG TAGGGACTTT GACAACTCGA ATAAAGTTCT 
    CTTCTTTGGC TTTAGATAAA CATACTTCTC TCATCATGTC ATGCATTTGA 
    CAATACTCTA TTCTCGAAGT CAAATAGCTT TCTTCAACAA CAACCATATT 
    TCTCCTCACT AGCTCTTCTA GATAGCTTTC TCCAGTATCT TGAATGGTTG 
    ATCCATCATG AAACGGCGTT ATTATTCCTT CTGCAACCCA ATAATTGAAC 
    AATATCTTCA CATCTATCTT GTAATCTTCA GGAAAATGGG CCAAGTAAAA 
    GAAGCAATGC TTTAACTGC

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 19906226 [Map]; Strand: w
      • AT1G53350.1 - [+] show detail - Disease resistance protein (CC-NBS-LRR class) family
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: ET13161 - 5-prime edge 
    CTTTCTCCCT GCCTGCTAAA ACCAAGTTGG AATTAGGTGA TCTAGTGAAC 
    TTAGAGTCGT TGACGAATTT CTCAACGAAA CACGGTAGTG TGACGGACCT 
    CCTCCGTATG ACTAAGCTCA CGGTTCTCAA CGTGATTTTC AGTGGCGAGT 
    GTACTTTCGA AACTCTATTG TTATCTCTTC GTGAGTTGAG AAATCTCGAG 
    ACGCTTAGTT TTCATGATTT CCAAAAAGTC AGCGTGGCAA ATCATGGGGG 
    AGAGCTCCTC GTTCTTGATT TTATTCATCT AAAGGATTTA ACATTGTCAA 
    TGCATCTGCC AAGGTTTCCG GATCAATACC GATTCCCTCC TCACCTTGCC 
    CACATATGGC TAATCGGATG CCGCATGGAG GAAGATCCAA TGCCGATTCT 
    AGAGAAGTTG CTTCATTTGA AATCGGTTTA TCTTTCATCC GGTGCATTCT 
    TGGGAAGGAG AATGGTGTGC TCGAAAGGCG GATTTCCTCA ACTACTTGCC 
    CTAAAAATGT CGTATAAAAA AGAGTTGGTA GAGTGGAGAG TAGAAGAAGG 
    GTCGATGCCA TGTCTTCGTA CTCTGACTAT AGACAATTGC AAGAAGTTGA 
    AGCAACTTCC GGATGGGCTC AAATACGTAA CATGCTTAAA GGAACTGAAG 
    ATAGAAAGAA TGAAAAGGGA GTGGACTGAG AGACTGGTAA TAGGTGGAGA 
    AGATTACTAC AAAGTCCAAC ACATTCCCAG TGTTCAATTT

AT1G53350.1

Model type
Protein coding
Short Description
Disease resistance protein (CC-NBS-LRR class) family
Computational Description
Disease resistance protein (CC-NBS-LRR class) family; FUNCTIONS IN: ATP binding; INVOLVED IN: apoptosis, defense response; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G35450.1); Has 15992 Blast hits to 14913 proteins in 520 species: Archae - 9; Bacteria - 880; Metazoa - 731; Fungi - 25; Plants - 14197; Viruses - 0; Other Eukaryotes - 150 (source: NCBI BLink).
Link
InterPro Scan - TAIR