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ET13171

CSHL Arabidopsis genetrap mutant lines

Original: ET13171

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13171

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 22258381 [Map]; Strand: w
      • AT3G60220.1 - [+] show detail - TOXICOS EN LEVADURA 4
        Distance: -2295; Region: intergenic
      • AT3G60238.1 - [+] show detail
        Distance: 704; Region: intergenic
    Flanking Genome Sequence: ET13171 - 3-prime edge
    ATGAAACGGT AGAGGTTTTT ACCGACCGTT ACCGACCGTT TTCATCCCTA 
    AAGATTAGTA TCTTTAAATC TCACTTTCCT ATATTATAAG TACCTTAATA
    TGGAAGTTCT TTTATGTTGA TTGATACTTT CTTTTTTAAA AGCGATTGTG
    AATTGTATAC AAGTTCAGAA TGATCCCAAG ATCTTACAGT GAATCTGTTT
    TCATTCTTTG AGCTTACCCT TTAATCATCT TGGCTCACAA TTTGTTCGAT
    CTGTCTTTAC ACTTTAAGCG GCTTTAATTT TTTAGGGATC ATTTGACTTT
    GAGCTAGCAA TCTAAGAGAT ATAGACTATT CTGAGAGGAA GAAAATCAGT
    TATTTTTTTT TTTAGTTGGA AATTAAAAAA AAAAAAACAT GCTTAGAGGG
    CAATACAGGT AAAGTGGGAC AAAATCAAGG GTCCAAAATT GATTTGGAAA
    GGAAATAAAT GAGTGACGGG GAAAATATTC TTGGTTGGAT AAATAAAGAA
    GGTGGCCGGT TTTAAAAACT TGGTGGCCCT TCCAAGGGTA CAAACCCAAA

AT3G60220.1

Model type
Protein coding
Short Description
TOXICOS EN LEVADURA 4
Curator Summary
Encodes a putative RING-H2 zinc finger protein ATL4 (ATL4).
Computational Description
TOXICOS EN LEVADURA 4 (ATL4); FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G72200.1); Has 8923 Blast hits to 8901 proteins in 292 species: Archae - 0; Bacteria - 8; Metazoa - 2301; Fungi - 667; Plants - 4759; Viruses - 54; Other Eukaryotes - 1134 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G60238.1

Model type
Other RNA
Curator Summary
Unknown gene
Link
InterPro Scan - TAIR