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ET13176

CSHL Arabidopsis genetrap mutant lines

Original: ET13176

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13176

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 12122054 [Map]; Strand: w
      • AT4G23140.1 - [+] show detail - cysteine-rich RLK (RECEPTOR-like protein kinase) 6
        Distance: 0; Region: exon1 (CDS)
      • AT4G23140.2 - [+] show detail - cysteine-rich RLK (RECEPTOR-like protein kinase) 6
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: ET13176 - 3-prime edge 
    CGGTAGAGGT ATTTTACCGA CCGTTACCGA CCGTTTTCAT CCCTAATTCC 
    ATTGATGGAA CTTTGCAAAC AACTCAAGCA GTCTGGTCTT GTAAGATCAG 
    GAGTGCACTG AAGCAGCCCG TACAAATTCT GGTATGCGGT CAATTCGGTA 
    TTCACCGTAT ATAATTTTCT AGAACTGTTG GCTGCTTTAC CGGCAGCTTC 
    ACTCATCGTG GAGGAAACAA AACTTGTGAA CCCGTCTATT TGTTTTTGAT 
    TTGAAGAAAT ATTATTGGTG TTCTGCATGA TTAATCCTCC TTCGTATATA 
    AGGGTCGCTA GAATATTCTT GTGAGAGTAT CTGAGAATGC ATTCCTCGTA 
    GTAAAACACG GCTTCTCTCG CCTTGGGACA AAGATTTAGG GTTTGATTGA 
    CAGAAAAGGC TATGCAGTTA CGGCAAACTT CCGGTGAGAC GTCTCCCCGG 
    CAAAGGAAAA GTCCGGTGAC TCTGTCGGGG GCTTTTCCTG CCGTGGCGTT 
    TTGGAATCCG GTGGAGTAAG AGGCGTTACG TGAAGATAGA GAGGACAAAA 
    GGGTTTTGAG ATTGGTGAAG TAAATGCTGT TACTTGAGAG TAATTTGTCG 
    TTTTTGGACA ATAATTATAT AGGTTATAAG GATCTTCAGC AGAAGCTGTG 
    AAGGAGCTAG TGAGGAATGA GAAAAGGAAA AGGAAGTTGA AAGATATAAG 
    AGAAGACATT GTTTGAGTAC CTTGATTT

AT4G23140.1

Model type
Protein coding
Short Description
cysteine-rich RLK (RECEPTOR-like protein kinase) 6
Curator Summary
Arabidopsis thaliana receptor-like protein kinase. Naming convention from Chen et al 2003 (PMID 14756307)
Computational Description
cysteine-rich RLK (RECEPTOR-like protein kinase) 6 (CRK6); FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Protein of unknown function DUF26 (InterPro:IPR002902), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 8 (TAIR:AT4G23160.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G23140.2

Model type
Protein coding
Short Description
cysteine-rich RLK (RECEPTOR-like protein kinase) 6
Curator Summary
Arabidopsis thaliana receptor-like protein kinase. Naming convention from Chen et al 2003 (PMID 14756307)
Computational Description
cysteine-rich RLK (RECEPTOR-like protein kinase) 6 (CRK6); FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Protein of unknown function DUF26 (InterPro:IPR002902), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 8 (TAIR:AT4G23160.1); Has 119608 Blast hits to 118061 proteins in 4543 species: Archae - 108; Bacteria - 13357; Metazoa - 44377; Fungi - 10093; Plants - 34036; Viruses - 376; Other Eukaryotes - 17261 (source: NCBI BLink).
Link
InterPro Scan - TAIR