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ET13179

CSHL Arabidopsis genetrap mutant lines

Original: ET13179

Phenotypes

Morphological phenotypes

Original description

  • semi-sterile (unconfirmed)
Anatomical entity
/structure development stage		 Phenotypes
seed (PO:0009010)
  • present in fewer numbers in organism (PATO:0001997)

Original: ET13179

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 4623288 [Map]; Strand: w
      • AT1G13480.1 - [+] show detail - Protein of unknown function (DUF1262)
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: ET13179 - 3-prime edge 
    ACGGTAGAGG TTTTTACCGA CCGTTACCGA CCGTTTTCAT CCCTAATGTG 
    TAAATATATG GTGTGTTCGT TTTAATGAGA GCTTTATGCA AATTCATGTG 
    TTATAAAGCT CTCATACATA TTTGTAAAGT TTATATAATA AATCTATATG 
    ATAATGTTTT GTAACAACGA AAATGGAGGA GAGGTTGTAG TTGATGTTGA 
    TGTAGAAACA GAATCGGTGA AGCTTGAGGG ACAAGAAACT AATTTGAGAG 
    AGGATTCAGG TGATGGAGTT GTTTGGTTTA GTGTCTTAAG AGATGAGAAA 
    GACGACAAGA AGATAGGTCT TGGATCTGTG GTCGTAGAGA GGATGAAATG 
    GGAAGAGGAA AGGTTTGGAT GGTTAAACGA AGCAGGCGAA AGATCTAACA 
    TTAAGAGATC AGAGAGATTT GAAGGCGGTT CATCGCATTG GAAGAGTTAT 
    CGATGTTATG TATTGATAGA GAGCTTTGAA TTGACGAGAA TGGATGGGAG 
    TTTGGTGTTC ACATATGAGT TTAGGCATGT TGATAAGCTA AAGAGCAAGT 
    GGGATTGAGT TTTATTCATC TTTTGTTTGT GTGTCATCTT TTGGTTCAAT 
    AAATTTGGTG AATTATAAGT TTTATGCAAG TTCATGTAAT AATAATAGAC 
    ATAAAGTCGC ATTTAATTAA ATTCATGTTT TAATACAGTA ATGAAATCTA 
    AAGTTGGTTG CTTGATATTC TTCATGATGG ATTTGTTGAC TTCTTGAAAT 
    CTGATACTAT TATTCACGCA ACGAATCCGC AAAAAGCTTC TTTATCTTAA 
    TGACGTGAAC TTCCATTGGT CAGTGACTCA GTGTGATTAT CTA

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 4627816 [Map]; Strand: w
      • AT1G13500.1 - [+] show detail - Protein of unknown function (DUF1262)
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: ET13179 - 5-prime edge 
    CTTTCTCCCT GGTACACATA ACACACAAAG AAGCTGAAAT AAACTCAATC 
    CCACTTGCTC TTCAACTTAT CAACATGTTT AAACTCATAT GTCAATACCA 
    AACTCCCATC AGTTCTCTTC AATTCAAAGG TCTCTACCAA TACATAGCAT 
    CTATAACTCT TCCAATATGG TCCACCGCCT TCAAATCTTT CAGTTCTCTT 
    AATGCTAGAC CTTTGTTCAT AGCCTTTGTT TAACCACCCA AACCTCTCCT 
    CTTCCCATTT CATCTTCACT CGA

AT1G13480.1

Model type
Protein coding
Short Description
Protein of unknown function (DUF1262)
Computational Description
Protein of unknown function (DUF1262); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1262 (InterPro:IPR010683); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1262) (TAIR:AT1G13520.1); Has 111 Blast hits to 104 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 111; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G13500.1

Model type
Protein coding
Short Description
Protein of unknown function (DUF1262)
Computational Description
Protein of unknown function (DUF1262); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1262 (InterPro:IPR010683); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1262) (TAIR:AT1G13530.1); Has 101 Blast hits to 94 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 101; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR