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ET13183

CSHL Arabidopsis genetrap mutant lines

Original: ET13183

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13183

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 5497914 [Map]; Strand: c
      • AT5G16730.1 - [+] show detail - Plant protein of unknown function (DUF827)
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: ET13183 - 3-prime edge 
    AAACGGTAGA GGTATTTTAC CGACCGTTAC CGACCGTTTT CATCCCTAAG 
    ACTCTTTACT CAGTTTCACT CTGTTTTAGT TTTATCCTAT TTTCTCTGGG 
    AAATTTTTTA GTAGATCGTA GTAGATCTGA TCCAAGTTAC TATTTTGAGA 
    AATTGTCAAT GATCGAGTTT TGGATCTACT AAATTCATTT CTACATTTGT 
    TTTGTCCTAA TTTTTTGCGG CAATTTATTT CTTTGTTCTG AGATCGACTG 
    TTGTTATTGT CTTTTGTTGG AAACAGAACT AGTTTGTCCG AAACAACAAC 
    TACTACTACT CCTACCGGGA AATCATCTCC AGCAACTCCA AGAATAGCAA 
    AAAGAACAGT TAATAAATCC GAAACTAGTA ATAATAATTC TCCATCTACT 
    ACTACTCCAC ATTCACGTCT TTCTCTTGAT CGTTCATCT

AT5G16730.1

Model type
Protein coding
Short Description
Plant protein of unknown function (DUF827)
Computational Description
LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF827, plant (InterPro:IPR008545), Spectrin/alpha-actinin (InterPro:IPR018159); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF827) (TAIR:AT3G02930.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR