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ET13190

CSHL Arabidopsis genetrap mutant lines

Original: ET13190

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13190

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 12871407 [Map]; Strand: w
      • AT1G35170.1 - [+] show detail - TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein
        Distance: 0; Region: intron2 (CDS)
    Flanking Genome Sequence: ET13190 - 5-prime edge
    TACTTTCTCT CTGTCTAGAT AACTCATTAA GAACTTATCT CTAACAATCT 
    TAATAAATAA CATCTCTTGA TTTTAGATTA TCTCAAGTTA AAATGTTAAT
    AACAATTTTC TTCTAAGCAT TACTAAATAA TTACTAATTA TAATTCATAT
    AAGAAAAGTA TGTATGTATG TAAATACTCA CATCGGCTGC AAGATTTAGG
    TCGGTGTCTC TACAACCAAT CTCTTTAAGA ATCTCCCTGA GGTGAAGAAA
    CGGACTTGAG ATCTCTGTTA TCCATATTGC TGCCACCATC TCGGATCCAC
    ACTTTAAATC CACCATATAT TCACAACAAA AAATAAGTTT ATTTAGTTAC
    TTAAGATCCA ACATTTCATA GTACATAATC TACAAGACTA CAAGTTACCA
    TT

AT1G35170.1

Model type
Protein coding
Short Description
TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein
Computational Description
TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane; CONTAINS InterPro DOMAIN/s: TRAM/LAG1/CLN8 homology domain (InterPro:IPR006634); BEST Arabidopsis thaliana protein match is: TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein (TAIR:AT1G35180.1); Has 146 Blast hits to 146 proteins in 57 species: Archae - 0; Bacteria - 0; Metazoa - 53; Fungi - 2; Plants - 53; Viruses - 0; Other Eukaryotes - 38 (source: NCBI BLink).
Link
InterPro Scan - TAIR