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ET13203

CSHL Arabidopsis genetrap mutant lines

Original: ET13203

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13203

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 20193749 [Map]; Strand: c
      • AT3G54550.1 - [+] show detail - Protein of unknown function (DUF506)
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: ET13203 - 3-prime edge 
    GTAGAGTATT TTACCGACCG TTACCGACCG TTTTCATCCC TAATAAATAG 
    CCCTTTCTTC CTAAAGCTCG TCTTTGCGGC TTTAGACAAA AATACCACAA 
    CCTTCGTCAA CCTGTCAACT TGTCCAACAA AGACGTAAGG CAATGTCTTC 
    ATCTCACTCG A

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 20193691 [Map]; Strand: c
      • AT3G54550.1 - [+] show detail - Protein of unknown function (DUF506)
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: ET13203 - 5-prime edge 
    TCCTACTTTC TCCCTGCTAT TTATGCCACC ATGGAGGAGA GCAGAGTATT 
    TGTTAACCAA ATGGGTGTCT CAATATGATC GTACTAAGCA AACTCAAGGA 
    GAAACCAGTG GACAAGCTGG TGTTGTCCAT CCTTAAATAT ATAATATTAG 
    CTTAATTATC AATAAACACA TGGGATTAAA ATCTCTTTTG ATTGTTTTTT 
    GTTGTAAGGG TATGATTTTA AGGATCATGA TCATATCCTC TTTGTTGTTT 
    TTAAGATTTC TTCTGATCCC TTGTAGAAGA AACCAATCTT TCTTTTGAGT 
    TTGTTTATTT TTATCGCATT TTTGCTTTCA TTTAAATTGA CTTCAAAATA 
    ATTATAAAAA GATTAACGAC AGCCACAAAA ATAGAGACCA ATCAGAGAAA 
    AGCACGAAAC AGAGTGTGCT AAAAACAGAG AAAGCGAAAA AGATAAGCCA 
    TTTAGACAAA TTTCTTCTAA CAATGTATAT CAAGGTTACG AAATCAAGGA 
    TATCACACTG CTGAAAATGC ATCTTCTGAC TCTAAACCAT ACACAAACTC 
    TGACTCATTG ATTTATCATG TTCAAAACGA CCTGAGCTCT GTGAAAGATT 
    TGATGGCTGA TCTAGGTGAC CCTATGGCTA

AT3G54550.1

Model type
Protein coding
Short Description
Protein of unknown function (DUF506)
Computational Description
Protein of unknown function (DUF506) ; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF506, plant (InterPro:IPR006502); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF506) (TAIR:AT2G38820.2); Has 393 Blast hits to 391 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 391; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Link
InterPro Scan - TAIR