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ET13204

CSHL Arabidopsis genetrap mutant lines

Original: ET13204

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13204

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 17024199 [Map]; Strand: w
      • AT3G46330.1 - [+] show detail - Leucine-rich repeat protein kinase family protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: ET13204 - 3-prime edge 
    CGGTAGAGGT ATTTTACCGA CCGTTACCGA CCGTTCTCAG AATGGTACAC 
    GGAAAGAGGT CATTCACAAA CCAACATCAA ACTCGTTGCA GATTTGTCTT 
    GTTAAGACTG GGGAAACTAC ACCAATGATC TCAGCCTTGG AAATACGGCC 
    CATGGGAGAT AATGATTCTT ATATCACCCA GTCTGGTTCT CTGAATCTCT 
    ACTTTCGGGT ATATCTAACC GAATCGACAA AGTACATAAG GTAACTTCAA 
    CTTAACATTG TCCCTTGTTT TTGCTCTGTT TTATTTTTTT GGGTCAGAGT 
    TCTTCAAGGA GAGGACTGTT TCCAGACACT AAATAAAAGT GTAAGACAAG 
    ACAAAAACAA TGAAAAAGAG GAATCTGATA ATATTTACAA TGGTCCAAGA 
    GGACAAAAAT GATATTATCC ATTCTTTTTT ACTGATTTCC CTGTTCAAAC 
    GTT

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24047259 [Map]; Strand: c
      • AT5G59680.1 - [+] show detail - Leucine-rich repeat protein kinase family protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: ET13204 - 5-prime edge 
    AGAGTCTAGT CTATCAAATC GATCGTGGCC CATGGATTTG GTCCAAGATA 
    CAGATCAAAC CTCGGGTCTT TGTCTTGGCC ATCATAATTT CCATAGATAA 
    ACCAAGCTCT GATCAGATGA TTTATTCCCT TCTCTACGTT TAGATTGTAG 
    CAGTTCCGTA TTCCTTCTGG AAAATATCTC AGCGTTGAGT ATGGCTTCAG 
    AAATCTAGCC TCCATATTTG CCTGGACTTT ACCAGTTTTT CCACTCTGGA 
    TGAATGTTGC GTCTGAAGAG TACTCTATTT CAGTATTTGA TTCTTTATAA 
    GGAGACAGTT CATTGGCGGG GAGCCCGCAA TCCAAACTGA TGAATCCTGT 
    AGAACAGAAA TGGATAAAAA TTAACACTAC GATCAAGAAC AAAAATGGTA 
    GTAAGATGGA GAAGAAGAAG CATACACAAA TATGTATATA TCTAAATTAA 
    AATGTGAATA CCTTGTTGGC TCTGAGCTTG AACAATATGA ATGATTGCCA 
    AAGTTCCGAT TAACGGCAAC AAAAGGGAAA GAGACCTCTC CATATTCA

AT3G46330.1

Model type
Protein coding
Short Description
Leucine-rich repeat protein kinase family protein
Computational Description
maternal effect embryo arrest 39 (MEE39); FUNCTIONS IN: kinase activity; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT3G46400.1); Has 157192 Blast hits to 122633 proteins in 4636 species: Archae - 101; Bacteria - 13531; Metazoa - 44718; Fungi - 9899; Plants - 69914; Viruses - 393; Other Eukaryotes - 18636 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G59680.1

Model type
Protein coding
Short Description
Leucine-rich repeat protein kinase family protein
Computational Description
Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT5G59650.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR